RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 LOXP28300 417 aaPredicted RBP12.82□□□□□ -0.36
LTBP4-228ENST00000600499 CSNK1A1P48729 337 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 ROR2Q01974 943 aaKnown RBP12.82□□□□□ -0.36
LTBP4-228ENST00000600499 RUNX1T1Q06455 604 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 COX10Q12887 443 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 PPP1R8Q12972 351 aaKnown RBP12.82□□□□□ -0.36
LTBP4-228ENST00000600499 MELKQ14680 651 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 TSC22D1Q15714 1073 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 TAB1Q15750 504 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 RFX4Q33E94 735 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 ANKRD34AQ69YU3 496 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 GPR139Q6DWJ6 353 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 RPL13AP3Q6NVV1 102 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 LRFN4Q6PJG9 635 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 SMARCD3Q6STE5 483 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 THSD4Q6ZMP0 1018 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 ZNF620Q6ZNG0 422 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 RASSF6Q6ZTQ3 369 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 TMEM179BQ7Z7N9 219 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 ARIH2OSQ8N7S6 290 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 WDR31Q8NA23 367 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 OR1K1Q8NGR3 316 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 FNDC8Q8TC99 324 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 BCL2L2Q92843 193 aaPredicted RBP12.82□□□□□ -0.36
LTBP4-228ENST00000600499 ZNF837Q96EG3 531 aaPredicted RBP12.82□□□□□ -0.36
LTBP4-228ENST00000600499 ALKBH3Q96Q83 286 aaPredicted RBP12.82□□□□□ -0.36
LTBP4-228ENST00000600499 RAB3IPQ96QF0 476 aaPredicted RBP12.82□□□□□ -0.36
LTBP4-228ENST00000600499 TSPAN32Q96QS1 320 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 MED18Q9BUE0 208 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 ALG12Q9BV10 488 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 NELFAQ9H3P2 528 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 SMURF2Q9HAU4 748 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 CRLF2Q9HC73 371 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 OBP2BQ9NPH6 170 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 B3GAT2Q9NPZ5 323 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 SLC17A5Q9NRA2 495 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 SLC25A15Q9Y619 301 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 U3KQV3 271 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 ABCA4P78363 2273 aa12.82□□□□□ -0.36
LTBP4-228ENST00000600499 CENPEQ02224 2701 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 ARPC4-TTLL3A0A0A6YYG9 625 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 CIB4A0PJX0 185 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 A6NIZ1 184 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 DEFB108AA8MXU0 73 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 ZNF99A8MXY4 864 aaPredicted RBP12.81□□□□□ -0.36
LTBP4-228ENST00000600499 IMPA2O14732 288 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 SIAH2O43255 324 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 TIPRLO75663 272 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 SERPINI2O75830 405 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 KRT33AO76009 404 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 TP53P04637 393 aaPredicted RBP12.81□□□□□ -0.36
LTBP4-228ENST00000600499 FCGR1AP12314 374 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 PRF1P14222 555 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 GSTM3P21266 225 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 IST1P53990 364 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 RAP1BP61224 184 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 RAP1AP62834 184 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 ATP6AP1Q15904 470 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 CEACAM16Q2WEN9 425 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 NRN1LQ496H8 165 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 C10orf128Q5T292 105 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 HMBOX1Q6NT76 420 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 ANKRD16Q6P6B7 361 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 C10orf67Q8IYJ2 551 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 NOXO1Q8NFA2 376 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 OR10G2Q8NGC3 310 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 OR6N1Q8NGY5 312 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 GIPC3Q8TF64 312 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 HDAC2Q92769 488 aaKnown RBP12.81□□□□□ -0.36
LTBP4-228ENST00000600499 KATNB1Q9BVA0 655 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 OR52D1Q9H346 318 aa12.81□□□□□ -0.36
LTBP4-228ENST00000600499 M0R3G1 203 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 GNGT2O14610 69 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 CASKO14936 926 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 IDH3BO43837 385 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 MGRN1O60291 552 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 RAD51DO75771 328 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 HRGP04196 525 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 NR2C1P13056 603 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 SDHAP31040 664 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 ERFP50548 548 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 ARF1P84077 181 aaKnown RBP12.8□□□□□ -0.36
LTBP4-228ENST00000600499 KPNB1Q14974 876 aaKnown RBP12.8□□□□□ -0.36
LTBP4-228ENST00000600499 CARD17Q5XLA6 110 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 ZFP1Q6P2D0 407 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 SHQ1Q6PI26 577 aaKnown RBP12.8□□□□□ -0.36
LTBP4-228ENST00000600499 CCDC36Q8IYA8 594 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 FAM169BQ8N8A8 192 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 AQP11Q8NBQ7 271 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 MCHR2Q969V1 340 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 SNX18Q96RF0 628 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 FEVQ99581 238 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 POLDIP3Q9BY77 421 aaKnown RBP12.8□□□□□ -0.36
LTBP4-228ENST00000600499 ULBP2Q9BZM5 246 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 DENND2DQ9H6A0 471 aaPredicted RBP12.8□□□□□ -0.36
LTBP4-228ENST00000600499 RASSF1Q9NS23 344 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 AMDHD2Q9Y303 409 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 ADAM18Q9Y3Q7 739 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 CDH10Q9Y6N8 788 aa12.8□□□□□ -0.36
LTBP4-228ENST00000600499 DCHS2Q6V1P9 2916 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms