RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 ALKBH6Q3KRA9 238 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 MMEL1Q495T6 779 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 GLIPR1L2Q4G1C9 344 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 SPRNQ5BIV9 151 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 TNFAIP8L3Q5GJ75 292 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 ZNF311Q5JNZ3 666 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 KLF17Q5JT82 389 aaPredicted RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 AVPI1Q5T686 147 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 CARD17Q5XLA6 110 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 SHQ1Q6PI26 577 aaKnown RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 C5orf46Q6UWT4 87 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 LINC00114Q6XXX2 140 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 DOK3Q7L591 496 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 PXKQ7Z7A4 578 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 UEVLDQ8IX04 471 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 C10orf111Q8N326 155 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 TEX29Q8N6K0 151 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 SCAIQ8N9R8 606 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 GLB1L3Q8NCI6 653 aaPredicted RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 NANPQ8TBE9 248 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 DNAJA4Q8WW22 397 aaPredicted RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 C22orf15Q8WYQ4 148 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 GTF2H4Q92759 462 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 MAL2Q969L2 176 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 ZNF48Q96MX3 618 aaPredicted RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 PAIP1Q9H074 479 aaKnown RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 A4GALTQ9NPC4 353 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 TCF7L2Q9NQB0 619 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 SLC7A8Q9UHI5 535 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 KLHL21Q9UJP4 597 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 LEF1Q9UJU2 399 aaPredicted RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 ZNF346Q9UL40 294 aaKnown RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 WIPI2Q9Y4P8 454 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 CORINQ9Y5Q5 1042 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 NOX1Q9Y5S8 564 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 WNK1Q9H4A3 2382 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 PPIAL4EA0A075B759 164 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 PPIAL4CA0A0B4J2A2 164 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 A0A0B4J2E0 115 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 IGHV1-69-2A0A0G2JMI3 117 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 A0A0G2JMP0 313 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 A0A0X1KG70 313 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 A0A1B0GX12 115 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 PPIAL4DF5H284 164 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 TRAPPC2LH3BP13 241 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 AKAP8O43823 692 aaKnown RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 UBOX5O94941 541 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 MFN2O95140 757 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 UBL3O95164 117 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 LYPD3O95274 346 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 SNAP29O95721 258 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 BCL10O95999 233 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 IL6P05231 212 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 MMP7P09237 267 aaPredicted RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 FAM157BP0CG42 384 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 PPIAL4FP0DN26 164 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 ETS2P15036 469 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 GATA3P23771 443 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 PRTN3P24158 256 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 EPHA3P29320 983 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 PRKAR1BP31321 381 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 MMP15P51511 669 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 UCP2P55851 309 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 PUDPQ08623 228 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 BST1Q10588 318 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 ZP4Q12836 540 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 HNRNPA0Q13151 305 aaKnown RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 STX3Q13277 289 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 OR1Q1Q15612 314 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 PCGF3Q3KNV8 242 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 PDCD4Q53EL6 469 aaKnown RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 ALG10BQ5I7T1 473 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 GKAP1Q5VSY0 366 aaPredicted RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 DCAF12L2Q5VW00 463 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 FAM91A1Q658Y4 838 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 RGS7BPQ6MZT1 257 aaPredicted RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 ULK3Q6PHR2 472 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 DHRS4L2Q6PKH6 230 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 TREML4Q6UXN2 200 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 USP51Q70EK9 711 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 MSRB3Q8IXL7 192 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 BCL6BQ8N143 479 aaPredicted RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 SLC22A24Q8N4F4 322 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 LRRC17Q8N6Y2 441 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 SIGLECL1Q8N7X8 197 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 SYT14Q8NB59 555 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 DEFB108BQ8NET1 73 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 OR4M2Q8NGB6 313 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 OR6X1Q8NH79 312 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 ZNF519Q8TB69 540 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 SYNPRQ8TBG9 265 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 TAF15Q92804 592 aaKnown RBP eCLIP5.18□□□□□ -1.58
VRK3-220ENST00000600259 SLC47A1Q96FL8 570 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 MAELQ96JY0 434 aaKnown RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 SH3GL3Q99963 347 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 ULBP2Q9BZM5 246 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 ARMC7Q9H6L4 198 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 C7orf69Q9H7B7 122 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 NTN4Q9HB63 628 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 SSU72Q9NP77 194 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms