RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TAB1Q15750 504 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 ZNF620Q6ZNG0 422 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 RASSF6Q6ZTQ3 369 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 ZNF627Q7L945 461 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 ARIH2OSQ8N7S6 290 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 AQP11Q8NBQ7 271 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 STEAP2Q8NFT2 490 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 OR10G2Q8NGC3 310 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 OR8D4Q8NGM9 314 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 GIPC3Q8TF64 312 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 PYDC1Q8WXC3 89 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 LRTOMTQ8WZ04 291 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 BCL2L2Q92843 193 aaPredicted RBP12.06□□□□□ -0.48
VRK3-219ENST00000600137 KISS1RQ969F8 398 aaPredicted RBP12.06□□□□□ -0.48
VRK3-219ENST00000600137 Q96M85 177 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 FEVQ99581 238 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 NIPSNAP1Q9BPW8 284 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 PLA2G12AQ9BZM1 189 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 OR52D1Q9H346 318 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 CRLF2Q9HC73 371 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 IL20Q9NYY1 176 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 GLTPQ9NZD2 209 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 PDZD2O15018 2839 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 OR5H1A6NKK0 313 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 CYSRT1A8MQ03 144 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 DEFB108AA8MXU0 73 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 CENPBD1B2RD01 187 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 ANKRD65E5RJM6 399 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 M0R3G1 203 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 IMPA2O14732 288 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 HNRNPRO43390 633 aaKnown RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 AKAP8O43823 692 aaKnown RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 ENTPD5O75356 428 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 DEAF1O75398 565 aaPredicted RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 PPP3CBP16298 524 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 IFNGR2P38484 337 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 ARF1P84077 181 aaKnown RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 CEACAM16Q2WEN9 425 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 ZNF362Q5T0B9 420 aaPredicted RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 SHQ1Q6PI26 577 aaKnown RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 SMARCD3Q6STE5 483 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 DPY19L2P2Q6ZN68 376 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 AMIGO2Q86SJ2 522 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 CLDN22Q8N7P3 220 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 C1orf162Q8NEQ5 155 aaPredicted RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 OR1K1Q8NGR3 316 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 MCHR2Q969V1 340 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 ZNF566Q969W8 418 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 GTPBP3Q969Y2 492 aaKnown RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 NRBF2Q96F24 287 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 SAMD8Q96LT4 415 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 EGLN3Q9H6Z9 239 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 PDP1Q9P0J1 537 aaPredicted RBP12.05□□□□□ -0.48
VRK3-219ENST00000600137 NDRG3Q9UGV2 375 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 MGAT4BQ9UQ53 548 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 SLC25A15Q9Y619 301 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 ROS1P08922 2347 aa12.05□□□□□ -0.48
VRK3-219ENST00000600137 A0A1W2PPR1 153 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 ZNF587BE7ETH6 402 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 GNGT2O14610 69 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 ARPC3O15145 178 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 RAD51DO75771 328 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 APEHP13798 732 aaKnown RBP12.04□□□□□ -0.48
VRK3-219ENST00000600137 CRYGSP22914 178 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 IL32P24001 234 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 FASP25445 335 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 ACVR1BP36896 505 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 CSNK1A1P48729 337 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 DAP3P51398 398 aaKnown RBP12.04□□□□□ -0.48
VRK3-219ENST00000600137 STK11Q15831 433 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 MESTQ5EB52 335 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 TIMM23BQ5SRD1 257 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 SLC25A47Q6Q0C1 308 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 KLHL17Q6TDP4 642 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 PTCHD4Q6ZW05 846 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 GPR137CQ8N3F9 429 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 SYT14Q8NB59 555 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 OR6N1Q8NGY5 312 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 C14orf79Q96F83 325 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 RAB3IPQ96QF0 476 aaPredicted RBP12.04□□□□□ -0.48
VRK3-219ENST00000600137 DDOQ99489 341 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 PKP2Q99959 881 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 USB1Q9BQ65 265 aaKnown RBP12.04□□□□□ -0.48
VRK3-219ENST00000600137 KRCC1Q9NPI7 259 aaPredicted RBP12.04□□□□□ -0.48
VRK3-219ENST00000600137 SLC17A5Q9NRA2 495 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 NPAP1Q9NZP6 1156 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 IER3IP1Q9Y5U9 82 aa12.04□□□□□ -0.48
VRK3-219ENST00000600137 SPG11Q96JI7 2443 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 RTTNQ86VV8 2226 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 POLQO75417 2590 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 CIB4A0PJX0 185 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 ZNF503-AS2A6NEH8 195 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 BHLHE40O14503 412 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 DHHO43323 396 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 CTAG2O75638 210 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 IGHG1P01857 330 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 QDPRP09417 244 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 RPL4P36578 427 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms