RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 AKAP8O43823 692 aaKnown RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 SOX14O95416 240 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 BCL10O95999 233 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 CD99P14209 185 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 SLC6A6P31641 620 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 RPL4P36578 427 aaKnown RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 ASCL1P50553 236 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 DAP3P51398 398 aaKnown RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 ART1P52961 327 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 RPL27P61353 136 aaKnown RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 ERVK-25P63136 954 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 PPP2R2BQ00005 443 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 TAF11Q15544 211 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 FBXL19-AS1Q494R0 122 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 TSPO2Q5TGU0 170 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 KDM4DQ6B0I6 523 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 RPL13AP3Q6NVV1 102 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 MEX3BQ6ZN04 569 aaKnown RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 DPY19L2P2Q6ZN68 376 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 LUZP2Q86TE4 346 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 ZNF100Q8IYN0 542 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 ZNF519Q8TB69 540 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 DNAJC9Q8WXX5 260 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 ADAD1Q96M93 576 aaKnown RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 CIB1Q99828 191 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 POLDIP3Q9BY77 421 aaKnown RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 NDEL1Q9GZM8 345 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 ZNF556Q9HAH1 456 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 SLC7A10Q9NS82 523 aa16.63■□□□□ 0.25
CCDC9-205ENST00000600117 TMEFF2Q9UIK5 374 aaPredicted RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 ZNF346Q9UL40 294 aaKnown RBP16.63■□□□□ 0.25
CCDC9-205ENST00000600117 FAM221AA4D161 298 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 PPP1R3DO95685 299 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 IGHV3-9P01782 118 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 RUNX1T1Q06455 604 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 TFF3Q07654 80 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 LGALS3BPQ08380 585 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 TOP3AQ13472 1001 aaPredicted RBP16.62■□□□□ 0.25
CCDC9-205ENST00000600117 CAMK2DQ13557 499 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 Q96M85 177 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 OSBPL10Q9BXB5 764 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 LINC00470Q9BZP3 86 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 SLCO5A1Q9H2Y9 848 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 DCLRE1BQ9H816 532 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 KIF17Q9P2E2 1029 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 STX18Q9P2W9 335 aaKnown RBP16.62■□□□□ 0.25
CCDC9-205ENST00000600117 MALT1Q9UDY8 824 aa16.62■□□□□ 0.25
CCDC9-205ENST00000600117 FOXD3Q9UJU5 478 aaPredicted RBP16.62■□□□□ 0.25
CCDC9-205ENST00000600117 ZNF726A6NNF4 738 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 BHLHE40O14503 412 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 MITFO75030 526 aaPredicted RBP16.61■□□□□ 0.25
CCDC9-205ENST00000600117 SLC43A1O75387 559 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 UPK3AO75631 287 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 TRMUO75648 421 aaKnown RBP16.61■□□□□ 0.25
CCDC9-205ENST00000600117 CNOT4O95628 575 aaKnown RBP16.61■□□□□ 0.25
CCDC9-205ENST00000600117 TXNDC12O95881 172 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 OSMP13725 252 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 APEHP13798 732 aaKnown RBP16.61■□□□□ 0.25
CCDC9-205ENST00000600117 SLC36A3Q495N2 470 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 PHYHD1Q5SRE7 291 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 CARD17Q5XLA6 110 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 FBXW9Q5XUX1 488 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 LINGO2Q7L985 606 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 C20orf196Q8IYI0 205 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 GABRG1Q8N1C3 465 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 PARP8Q8N3A8 854 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 ARIH2OSQ8N7S6 290 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 POMGNT2Q8NAT1 580 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 TMEM54Q969K7 222 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 SLC25A44Q96H78 314 aaPredicted RBP16.61■□□□□ 0.25
CCDC9-205ENST00000600117 MRPL13Q9BYD1 178 aaKnown RBP16.61■□□□□ 0.25
CCDC9-205ENST00000600117 KCNJ16Q9NPI9 418 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 PAPOLBQ9NRJ5 636 aaKnown RBP16.61■□□□□ 0.25
CCDC9-205ENST00000600117 TBC1D23Q9NUY8 699 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 USE1Q9NZ43 259 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 NKX1-2Q9UD57 310 aaPredicted RBP16.61■□□□□ 0.25
CCDC9-205ENST00000600117 POFUT2Q9Y2G5 429 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 IER3IP1Q9Y5U9 82 aa16.61■□□□□ 0.25
CCDC9-205ENST00000600117 OR6C65A6NJZ3 312 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 H0YHG0 523 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 EI24O14681 340 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 ARPC3O15145 178 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 PGA4P0DJD7 388 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 PGA3P0DJD8 388 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 ACADSP16219 412 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 FOXG1P55316 489 aaPredicted RBP16.6■□□□□ 0.25
CCDC9-205ENST00000600117 DAG1Q14118 895 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 MESTQ5EB52 335 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 CLEC12AQ5QGZ9 265 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 FAM205BPQ63HN1 556 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 GPR139Q6DWJ6 353 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 Q6ZT83 130 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 BEND4Q6ZU67 534 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 HDDC2Q7Z4H3 204 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 CBR4Q8N4T8 237 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 OR52L1Q8NGH7 329 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 OR4Q3Q8NH05 313 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 MAGEE2Q8TD90 523 aaPredicted RBP16.6■□□□□ 0.25
CCDC9-205ENST00000600117 HDAC2Q92769 488 aaKnown RBP16.6■□□□□ 0.25
CCDC9-205ENST00000600117 LRR1Q96L50 414 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms