RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 XKRYO14609 159 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 TRMUO75648 421 aaKnown RBP12.65□□□□□ -0.38
VRK3-213ENST00000597215 LYZL6O75951 148 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 ITGA5P08648 1049 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 PGA4P0DJD7 388 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 PGA3P0DJD8 388 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 NR2C1P13056 603 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 APEHP13798 732 aaKnown RBP12.65□□□□□ -0.38
VRK3-213ENST00000597215 SDHAP31040 664 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 CCKARP32238 428 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 ACVR1BP36896 505 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 ROR2Q01974 943 aaKnown RBP12.65□□□□□ -0.38
VRK3-213ENST00000597215 TGFBR3Q03167 851 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 KLHL17Q6TDP4 642 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 MEX3BQ6ZN04 569 aaKnown RBP12.65□□□□□ -0.38
VRK3-213ENST00000597215 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
VRK3-213ENST00000597215 FAM122BQ7Z309 247 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 DMRTC2Q8IXT2 367 aaPredicted RBP12.65□□□□□ -0.38
VRK3-213ENST00000597215 ZNF433Q8N7K0 673 aaPredicted RBP12.65□□□□□ -0.38
VRK3-213ENST00000597215 ARIH2OSQ8N7S6 290 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 ICA1LQ8NDH6 482 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 TMEM54Q969K7 222 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 Q96M85 177 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 SPOCK3Q9BQ16 436 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 USB1Q9BQ65 265 aaKnown RBP12.65□□□□□ -0.38
VRK3-213ENST00000597215 ALG12Q9BV10 488 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 IFT27Q9BW83 186 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 ULBP2Q9BZM5 246 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 GABARAPL1Q9H0R8 117 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 EGLN3Q9H6Z9 239 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 SLC24A3Q9HC58 644 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 GPR35Q9HC97 309 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 TBC1D23Q9NUY8 699 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 IL20Q9NYY1 176 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 GLTPQ9NZD2 209 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 NDRG3Q9UGV2 375 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 OAZ3Q9UMX2 235 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 IER3IP1Q9Y5U9 82 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 TUBAL3A6NHL2 446 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 RPL36A-HNRNPH2H7BZ11 118 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 IDH3BO43837 385 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 SOX14O95416 240 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 PPP1R3DO95685 299 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 PPP3CBP16298 524 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 SH3BGRP55822 239 aaPredicted RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 RUNX1T1Q06455 604 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 CD47Q08722 323 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 KRR1Q13601 381 aaKnown RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 STK11Q15831 433 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 PHYHD1Q5SRE7 291 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 C9orf135Q5VTT2 229 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 SP5Q6BEB4 398 aaPredicted RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 FAHD1Q6P587 224 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 ZNF771Q7L3S4 317 aaPredicted RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 LINGO2Q7L985 606 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 PQLC1Q8N2U9 271 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 SYT14Q8NB59 555 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 ACBD4Q8NC06 268 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 TEX47Q8TBZ9 253 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 FNDC8Q8TC99 324 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 MAGEE2Q8TD90 523 aaPredicted RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 HDAC2Q92769 488 aaKnown RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 ERMAPQ96PL5 475 aaPredicted RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 MRPL13Q9BYD1 178 aaKnown RBP12.64□□□□□ -0.39
VRK3-213ENST00000597215 ACTR6Q9GZN1 396 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 CRLF2Q9HC73 371 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 POFUT2Q9Y2G5 429 aa12.64□□□□□ -0.39
VRK3-213ENST00000597215 TEX13CA0A0J9YWL9 993 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 SAC3D1A6NKF1 404 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 H3BN98 237 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 IMPA2O14732 288 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 ARPC3O15145 178 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 ARHGEF9O43307 516 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 RAD51DO75771 328 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 BAG2O95816 211 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 TXNDC12O95881 172 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 OSMP13725 252 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 COX6B1P14854 86 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 NOS3P29474 1203 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 KIR2DL3P43628 341 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 DAPP51397 102 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 FOXG1P55316 489 aaPredicted RBP12.63□□□□□ -0.39
VRK3-213ENST00000597215 TSC22D1Q15714 1073 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 HIST3H3Q16695 136 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 CEACAM16Q2WEN9 425 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 MESTQ5EB52 335 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 CLEC12AQ5QGZ9 265 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 OR7E24Q6IFN5 339 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 ADCK1Q86TW2 530 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 OR2T33Q8NG76 320 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 OR8D4Q8NGM9 314 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 RASD2Q96D21 266 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 MED18Q9BUE0 208 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 TSSK6Q9BXA6 273 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 OSBPL10Q9BXB5 764 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 PLA2G12AQ9BZM1 189 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 PAPOLBQ9NRJ5 636 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms