RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 DMRTC2Q8IXT2 367 aaPredicted RBP9.29□□□□□ -0.92
LIG1-210ENST00000596332 ZNF100Q8IYN0 542 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 WDR31Q8NA23 367 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 ZNRF4Q8WWF5 429 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 MUS81Q96NY9 551 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 WFIKKN1Q96NZ8 548 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 BDH2Q9BUT1 245 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 OSBPL10Q9BXB5 764 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 ZNF224Q9NZL3 707 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 NKX1-2Q9UD57 310 aaPredicted RBP9.29□□□□□ -0.92
LIG1-210ENST00000596332 OAZ3Q9UMX2 235 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 UGT2A1Q9Y4X1 527 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 IER3IP1Q9Y5U9 82 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 CDH10Q9Y6N8 788 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 DCHS2Q6V1P9 2916 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 DOPEY2Q9Y3R5 2298 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 CELSR2Q9HCU4 2923 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 G3V2T6 193 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 DCTN6O00399 190 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 SIAH2O43255 324 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 LYZL6O75951 148 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 SOX14O95416 240 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 PPP1R3DO95685 299 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 SCG5P05408 212 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 FCGR1AP12314 374 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 ANXA8P13928 327 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 LOXP28300 417 aaPredicted RBP9.28□□□□□ -0.92
LIG1-210ENST00000596332 IFNGR2P38484 337 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 CDK5Q00535 292 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 FMODQ06828 376 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 ITGADQ13349 1161 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 P2RY6Q15077 328 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 TAF11Q15544 211 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 CARD17Q5XLA6 110 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 STK32CQ86UX6 486 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 ZNF295-AS1Q8N0V1 137 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 PQLC1Q8N2U9 271 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 LNX2Q8N448 690 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 POMGNT2Q8NAT1 580 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 NPEPL1Q8NDH3 523 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 LINC01560Q8TB33 94 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 BCL2L2Q92843 193 aaPredicted RBP9.28□□□□□ -0.92
LIG1-210ENST00000596332 MCHR2Q969V1 340 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 RASD2Q96D21 266 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 ADAD1Q96M93 576 aaKnown RBP9.28□□□□□ -0.92
LIG1-210ENST00000596332 SPOCK3Q9BQ16 436 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 CRLF2Q9HC73 371 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 ASB6Q9NWX5 421 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 GLTPQ9NZD2 209 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 PLEKHB1Q9UF11 243 aaPredicted RBP9.28□□□□□ -0.92
LIG1-210ENST00000596332 GPR52Q9Y2T5 361 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 PRR14LQ5THK1 2151 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 NBPF19A0A087WUL8 3843 aa9.28□□□□□ -0.92
LIG1-210ENST00000596332 A0A1W2PRG6 482 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SLC22A23A1A5C7 686 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 FAM221AA4D161 298 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SAC3D1A6NKF1 404 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 CENPBD1B2RD01 187 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 PRSS44E7EML9 344 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 H7C1C5 153 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 M0R3G1 203 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SOCS2O14508 198 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SLC43A1O75387 559 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SLC2A10O95528 541 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ALPLP05186 524 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 OSMP13725 252 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ANPEPP15144 967 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 HIST1H1CP16403 213 aaKnown RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 GSTM3P21266 225 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 MPGP29372 298 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SDHAP31040 664 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ACVR1BP36896 505 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 GIPRP48546 466 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 LCN6P62502 163 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ARF1P84077 181 aaKnown RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 SORDQ00796 357 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 MYBPC1Q00872 1141 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 IL1RL1Q01638 556 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ROR2Q01974 943 aaKnown RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 ETFDHQ16134 617 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 CEACAM16Q2WEN9 425 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SLC36A3Q495N2 470 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 C10orf128Q5T292 105 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 C9orf135Q5VTT2 229 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 TMEM236Q5W0B7 351 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 FOXL2NBQ6ZUU3 175 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 HIPK1Q86Z02 1210 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ZDHHC13Q8IUH4 622 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 PARP8Q8N3A8 854 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SVOPLQ8N434 492 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 IQCF1Q8N6M8 205 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 SYT14Q8NB59 555 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 FGFBP3Q8TAT2 258 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 FANK1Q8TC84 345 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 MAGEE2Q8TD90 523 aaPredicted RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 HTRA1Q92743 480 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ZNF75AQ96N20 296 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ALKBH3Q96Q83 286 aaPredicted RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 CIB1Q99828 191 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 TSSK6Q9BXA6 273 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms