RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ZNF813Q6ZN06 617 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 PIWIL3Q7Z3Z3 882 aaKnown RBP11.34□□□□□ -0.59
USE1-207ENST00000596136 RNF113BQ8IZP6 322 aaKnown RBP11.34□□□□□ -0.59
USE1-207ENST00000596136 ANKS4BQ8N8V4 417 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 IL17RDQ8NFM7 739 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 OR4F15Q8NGB8 312 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 ZNF566Q969W8 418 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 HSH2DQ96JZ2 352 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 FOXB1Q99853 325 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 ULBP2Q9BZM5 246 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 BARX1Q9HBU1 254 aaPredicted RBP11.34□□□□□ -0.59
USE1-207ENST00000596136 ZNF224Q9NZL3 707 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 POFUT2Q9Y2G5 429 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 HIF3AQ9Y2N7 669 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 RTTNQ86VV8 2226 aa11.33□□□□□ -0.59
USE1-207ENST00000596136 FAM171A2A8MVW0 826 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 J3KTA2 159 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 NDUFS7O75251 213 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 SERPINI2O75830 405 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 PDE5AO76074 875 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 CALCRP30988 508 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 AQP2P41181 271 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
USE1-207ENST00000596136 HGFACQ04756 655 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 PRKCDQ05655 676 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 TNK1Q13470 666 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 FHL1Q13642 323 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 CLEC12BQ2HXU8 276 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 ANKDD1AQ495B1 522 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 NRN1LQ496H8 165 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 ARMC4Q5T2S8 1044 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 MDP1Q86V88 176 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 MYPOPQ86VE0 399 aaPredicted RBP11.33□□□□□ -0.6
USE1-207ENST00000596136 NUP37Q8NFH4 326 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 ASB10Q8WXI3 467 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 BPIFA2Q96DR5 249 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 C7orf34Q96L11 122 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 LRRC37BQ96QE4 947 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 SMR3AQ99954 134 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 FNDC11Q9BVV2 318 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 CACNG6Q9BXT2 260 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 ANKRD19PQ9H560 264 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 GORASP2Q9H8Y8 452 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 SEC61A2Q9H9S3 476 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 INIPQ9NRY2 104 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 DCAF13Q9NV06 445 aaKnown RBP11.33□□□□□ -0.6
USE1-207ENST00000596136 CD300AQ9UGN4 299 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 GDF2Q9UK05 429 aaPredicted RBP11.33□□□□□ -0.6
USE1-207ENST00000596136 RPS6KA6Q9UK32 745 aa11.33□□□□□ -0.6
USE1-207ENST00000596136 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 A0A087WUU8 490 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 IGHV2OR16-5A0A0B4J2B6 119 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 A0A1W2PRG6 482 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 DYNC1I1O14576 645 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 DHHO43323 396 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 PIP5K1CO60331 668 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 DCTN3O75935 186 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 SEC14L2O76054 403 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 IGHG1P01857 330 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 HLA-HP01893 362 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 F13BP05160 661 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 CELA3BP08861 270 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 HSD17B1P14061 328 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 B4GALT1P15291 398 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 ACADSP16219 412 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 NCK1P16333 377 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 ZNF14P17017 642 aaPredicted RBP11.32□□□□□ -0.6
USE1-207ENST00000596136 YAP1P46937 504 aaKnown RBP11.32□□□□□ -0.6
USE1-207ENST00000596136 CHRNB3Q05901 458 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 RUNX1T1Q06455 604 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 MELKQ14680 651 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 LAPTM4AQ15012 233 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 TAF11Q15544 211 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 GLYATQ6IB77 296 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 FKBP9P1Q75LS8 142 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 HDDC2Q7Z4H3 204 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 PGAM4Q8N0Y7 254 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 LRRC75AQ8NAA5 344 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 FAM156AQ8NDB6 213 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 MOSPD2Q8NHP6 518 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 ACOT11Q8WXI4 607 aaPredicted RBP11.32□□□□□ -0.6
USE1-207ENST00000596136 FAM162AQ96A26 154 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 NMD3Q96D46 503 aaKnown RBP11.32□□□□□ -0.6
USE1-207ENST00000596136 KCNS3Q9BQ31 491 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 TXNIPQ9H3M7 391 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 ZNF442Q9H7R0 627 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 NOX3Q9HBY0 568 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 CA10Q9NS85 328 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 ARL8BQ9NVJ2 186 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 STX18Q9P2W9 335 aaKnown RBP11.32□□□□□ -0.6
USE1-207ENST00000596136 EGFL7Q9UHF1 273 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 TAGLN3Q9UI15 199 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 ENPP4Q9Y6X5 453 aa11.32□□□□□ -0.6
USE1-207ENST00000596136 FN1P02751 2386 aaKnown RBP11.32□□□□□ -0.6
USE1-207ENST00000596136 A0A1W2PRQ8 180 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 MGRN1O60291 552 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 ENTPD5O75356 428 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 TRMUO75648 421 aaKnown RBP11.31□□□□□ -0.6
USE1-207ENST00000596136 IGHMP01871 453 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 HEXAP06865 529 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms