RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ZNF814B7Z6K7 855 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 NPIPA2E9PIF3 369 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 NPIPA3F8WFD2 350 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 AQP7O14520 342 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 CPN1P15169 458 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 CDH11P55287 796 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 CDH15P55291 814 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 GABARAPL2P60520 117 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 RPS7P62081 194 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 MELKQ14680 651 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 KLHL12Q53G59 568 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 KLHL22Q53GT1 634 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 FAM205BPQ63HN1 556 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 MEPCEQ7L2J0 689 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 STX19Q8N4C7 294 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 CYB561A3Q8NBI2 242 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 NPEPL1Q8NDH3 523 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 SARAFQ96BY9 339 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 WDYHV1Q96HA8 205 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 DDOQ99489 341 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 SF3B5Q9BWJ5 86 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 CCDC90BQ9GZT6 254 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 MED20Q9H944 212 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 CCNB1IP1Q9NPC3 277 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 LUZP4Q9P127 313 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 KLHL13Q9P2N7 655 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 SPRR3Q9UBC9 169 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 SNX5Q9Y5X3 404 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 NPIPB13A6NJU9 1138 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 NPIPB4C9JG80 1138 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 SMAD9O15198 467 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 KLK2P20151 261 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 HTR1FP30939 366 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 ATP6V1E1P36543 226 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC25A1P53007 311 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC16A1P53985 500 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 BIDP55957 195 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 TMED1Q13445 227 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 APOFQ13790 326 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 PON3Q15166 354 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 MESTQ5EB52 335 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 ARMC4Q5T2S8 1044 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 EEF1A1P5Q5VTE0 462 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 FAM180AQ6UWF9 173 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 ADCK1Q86TW2 530 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 SIAH3Q8IW03 269 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 GHDCQ8N2G8 530 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 TEX19Q8NA77 164 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 GALNT11Q8NCW6 608 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 BBS1Q8NFJ9 593 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNF519Q8TB69 540 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 ASB10Q8WXI3 467 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 RNFT2Q96EX2 444 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNF845Q96IR2 970 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 RBP7Q96R05 134 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 SNX18Q96RF0 628 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 COPS4Q9BT78 406 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 DUSP21Q9H596 190 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 SRA1Q9HD15 236 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 MED29Q9NX70 200 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 CNOT2Q9NZN8 540 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 B3GAT1Q9P2W7 334 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 ERVK-18Q9QC07 812 aa11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 WARS2Q9UGM6 360 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 MCTS1Q9ULC4 181 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-209ENST00000595803 A0A1B0GTH9 108 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 PRSS37A4D1T9 235 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 OR6C68A6NDL8 312 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC22A31A6NKX4 558 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 RGS10O43665 173 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 AHCYL1O43865 530 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 CYTIPO60759 359 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 MRPS14O60783 128 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 RAMP1O60894 148 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 TRMUO75648 421 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 DBTP11182 482 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 ATP6V1B1P15313 513 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 MTNR1AP48039 350 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 CLDN17P56750 224 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNF91Q05481 1191 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 PIGFQ07326 219 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 RASGEF1BQ0VAM2 473 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC17A1Q14916 467 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 POU4F3Q15319 338 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 KRTCAP3Q53RY4 240 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 LCN1P1Q5VSP4 162 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 GTF2IRD2BQ6EKJ0 949 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 NIPAL3Q6P499 406 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNF773Q6PK81 442 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 NHLRC1Q6VVB1 395 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 CREB3L2Q70SY1 520 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 AHSA2Q719I0 299 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 FCRLAQ7L513 359 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 GTF2IRD2Q86UP8 949 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 PM20D2Q8IYS1 436 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 OR9K2Q8NGE7 335 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 OR9Q1Q8NGQ5 310 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 OR2T4Q8NH00 348 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms