RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MRASO14807 208 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 SLC22A2O15244 555 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 SYNGR3O43761 229 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 HLA-HP01893 362 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 THY1P04216 161 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 CBLP22681 906 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 NR4A1P22736 598 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 DVL1P1P54792 670 aaPredicted RBP12.7□□□□□ -0.38
PNKP-202ENST00000593706 CDH12P55289 794 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 NCALDP61601 193 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 OR1Q1Q15612 314 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 VMACQ2NL98 169 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 SHQ1Q6PI26 577 aaKnown RBP12.7□□□□□ -0.38
PNKP-202ENST00000593706 C12orf54Q6X4T0 127 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 LINC00114Q6XXX2 140 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 H1FNTQ75WM6 255 aaPredicted RBP12.7□□□□□ -0.38
PNKP-202ENST00000593706 PATL1Q86TB9 770 aaKnown RBP12.7□□□□□ -0.38
PNKP-202ENST00000593706 SLC30A8Q8IWU4 369 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 UEVLDQ8IX04 471 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 TMEM123Q8N131 208 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.7□□□□□ -0.38
PNKP-202ENST00000593706 OR6S1Q8NH40 331 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 RNF217Q8TC41 542 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 SLC41A3Q96GZ6 507 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 MRPL37Q9BZE1 423 aaKnown RBP12.7□□□□□ -0.38
PNKP-202ENST00000593706 PCDHAC1Q9H158 963 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 B3GAT2Q9NPZ5 323 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 TRAV36DV7A0A075B6V5 113 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 LOC102725191A0A1B0GVB3 256 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 B4DSR2 109 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 ATP8B1O43520 1251 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 TRAF3IP2O43734 574 aaPredicted RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 GPR6P46095 362 aaPredicted RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 RPS23P62266 143 aaKnown RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 GALK2Q01415 458 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 POU3F1Q03052 451 aaPredicted RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 PIGFQ07326 219 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 SCGB2A2Q13296 93 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 CYLC2Q14093 348 aaPredicted RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 GKAP1Q5VSY0 366 aaPredicted RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 NHLRC1Q6VVB1 395 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 WDR88Q6ZMY6 472 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 ZNF813Q6ZN06 617 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 RANBP3LQ86VV4 465 aaPredicted RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 RBM45Q8IUH3 476 aaKnown RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 ADPRHL1Q8NDY3 354 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 OR6T1Q8NGN1 323 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 SLC47A1Q96FL8 570 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 ZNF583Q96ND8 569 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 SYT3Q9BQG1 590 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 TMEM43Q9BTV4 400 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 ZNF426Q9BUY5 554 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 MS4A5Q9H3V2 200 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 METTL17Q9H7H0 456 aaPredicted RBP12.69□□□□□ -0.38
PNKP-202ENST00000593706 LPAR2Q9HBW0 351 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 SELENONQ9NZV5 590 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 ARMCX1Q9P291 453 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 REV1Q9UBZ9 1251 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 CAPN7Q9Y6W3 813 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 TANC2Q9HCD6 1990 aa12.69□□□□□ -0.38
PNKP-202ENST00000593706 RAB36O95755 333 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 BGLAPP02818 100 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 IGFBP1P08833 259 aaPredicted RBP12.68□□□□□ -0.38
PNKP-202ENST00000593706 SAGP10523 405 aaPredicted RBP12.68□□□□□ -0.38
PNKP-202ENST00000593706 B4GALT1P15291 398 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 TCN1P20061 433 aaPredicted RBP12.68□□□□□ -0.38
PNKP-202ENST00000593706 LSP1P33241 339 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 ALDH3B1P43353 468 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 PTDSS1P48651 473 aaKnown RBP12.68□□□□□ -0.38
PNKP-202ENST00000593706 MFSD13AQ14CX5 517 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 MAPRE2Q15555 327 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 PHYHD1Q5SRE7 291 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 ZNF613Q6PF04 617 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 OR6N1Q8NGY5 312 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 EMC6Q9BV81 110 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 ASPNQ9BXN1 380 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 ULBP2Q9BZM5 246 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 POFUT2Q9Y2G5 429 aa12.68□□□□□ -0.38
PNKP-202ENST00000593706 PKD1L1Q8TDX9 2849 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 LOC100653049A0A140TA62 436 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 A0A1W2PPW3 197 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 CHP2O43745 196 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 SERPINI2O75830 405 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 KRT34O76011 436 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 HPRP00739 348 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 ACHEP22303 614 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 EVX1P49640 407 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 ACTG1P63261 375 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 RUNX1T1Q06455 604 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 CAMK2DQ13557 499 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 ELFN2Q5R3F8 820 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 INTS11Q5TA45 600 aaKnown RBP12.67□□□□□ -0.38
PNKP-202ENST00000593706 C20orf196Q8IYI0 205 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 C10orf53Q8N6V4 93 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 SCAIQ8N9R8 606 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 CLDND2Q8NHS1 167 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 TMEM186Q96B77 213 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms