RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 B4DSR2 109 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 ADORA3P0DMS8 318 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 ALDH3B1P43353 468 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 BIDP55957 195 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 PCBP3P57721 371 aaKnown RBP20.55■□□□□ 0.88
LSM4-202ENST00000593564 AGKQ53H12 422 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 SMYD1Q8NB12 490 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 OR6X1Q8NH79 312 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 LRRC8CQ8TDW0 803 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 TMEM54Q969K7 222 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 SLC7A8Q9UHI5 535 aa20.55■□□□□ 0.88
LSM4-202ENST00000593564 C11orf98E9PRG8 122 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 M0R3H8 397 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 CHP2O43745 196 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 OR6A2O95222 327 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 HPXP02790 462 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 ACHEP22303 614 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 GPR6P46095 362 aaPredicted RBP20.54■□□□□ 0.88
LSM4-202ENST00000593564 SEC24CP53992 1094 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 RAB39AQ14964 217 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 RUNDC3AQ59EK9 446 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 LRP11Q86VZ4 500 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 PTOV1Q86YD1 416 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 SKA3Q8IX90 412 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 C11orf65Q8NCR3 313 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 RDH5Q92781 318 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 GLTPQ9NZD2 209 aa20.54■□□□□ 0.88
LSM4-202ENST00000593564 MYEF2Q9P2K5 600 aaKnown RBP20.54■□□□□ 0.88
LSM4-202ENST00000593564 ENTPD5O75356 428 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 ERLIN1O75477 346 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 SERPINA5P05154 406 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 TCN1P20061 433 aaPredicted RBP20.53■□□□□ 0.88
LSM4-202ENST00000593564 COL8A2P25067 703 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 LSP1P33241 339 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 MRPS11P82912 194 aaKnown RBP20.53■□□□□ 0.88
LSM4-202ENST00000593564 RBBP4Q09028 425 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 ZP4Q12836 540 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 MAD2L1BPQ15013 274 aaPredicted RBP20.53■□□□□ 0.88
LSM4-202ENST00000593564 ZNF74Q16587 644 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 DUSP7Q16829 419 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 BEND6Q5SZJ8 279 aaPredicted RBP20.53■□□□□ 0.88
LSM4-202ENST00000593564 WDR88Q6ZMY6 472 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 SLC35D2Q76EJ3 337 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 GLCCI1Q86VQ1 547 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 ZNF584Q8IVC4 421 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 RACGAP1Q9H0H5 632 aa20.53■□□□□ 0.88
LSM4-202ENST00000593564 PATE4P0C8F1 98 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 ITGA2P17301 1181 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 NPTX1Q15818 432 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 AGBL2Q5U5Z8 902 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 RINLQ6ZS11 566 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 SLC22A24Q8N4F4 322 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 GPR32P1Q8NGA4 272 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 OR6T1Q8NGN1 323 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 CLDND2Q8NHS1 167 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 FGFBP3Q8TAT2 258 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 TAS2R5Q9NYW4 299 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 DUSP13Q9UII6 198 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 ZNF346Q9UL40 294 aaKnown RBP20.52■□□□□ 0.88
LSM4-202ENST00000593564 FZR1Q9UM11 496 aa20.52■□□□□ 0.88
LSM4-202ENST00000593564 LYPD3O95274 346 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 TFP02787 698 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 OR8G3PP0DMU2 310 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 SAGP10523 405 aaPredicted RBP20.51■□□□□ 0.87
LSM4-202ENST00000593564 TMEM33P57088 247 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 CYP51A1Q16850 503 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 ENTPD8Q5MY95 495 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 LRFN4Q6PJG9 635 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 CARM1Q86X55 608 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 ZNF566Q969W8 418 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 SLC25A44Q96H78 314 aaPredicted RBP20.51■□□□□ 0.87
LSM4-202ENST00000593564 RABEP2Q9H5N1 569 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 ZNF385DQ9H6B1 395 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 NANSQ9NR45 359 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 TMEM38BQ9NVV0 291 aa20.51■□□□□ 0.87
LSM4-202ENST00000593564 LEF1Q9UJU2 399 aaPredicted RBP20.51■□□□□ 0.87
LSM4-202ENST00000593564 A0A1W2PPW3 197 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 CPSF4LA6NMK7 179 aaKnown RBP20.5■□□□□ 0.87
LSM4-202ENST00000593564 M0QX08 132 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 RNF13O43567 381 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 CH25HO95992 272 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 OPN1SWP03999 348 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 THY1P04216 161 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 TTC33Q6PID6 262 aaPredicted RBP20.5■□□□□ 0.87
LSM4-202ENST00000593564 DHDDSQ86SQ9 333 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 ADAMTS16Q8TE57 1224 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 YIPF5Q969M3 257 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 SLC19A3Q9BZV2 496 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 ZNF275Q9NSD4 429 aaPredicted RBP20.5■□□□□ 0.87
LSM4-202ENST00000593564 METRNQ9UJH8 293 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 ZNF229Q9UJW7 825 aa20.5■□□□□ 0.87
LSM4-202ENST00000593564 SLC22A23A1A5C7 686 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 DHHO43323 396 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 NCR1O76036 304 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 FARS2O95363 451 aaKnown RBP20.49■□□□□ 0.87
LSM4-202ENST00000593564 NAT2P11245 290 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 RGS7BPQ6MZT1 257 aaPredicted RBP20.49■□□□□ 0.87
LSM4-202ENST00000593564 DEF8Q6ZN54 512 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 DPPA2Q7Z7J5 298 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 MEX3DQ86XN8 651 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms