RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PLGP00747 810 aaPredicted RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 PSKH1P11801 424 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 IMPDH2P12268 514 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 OR5M10Q6IEU7 315 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 OTOSQ8NHW6 89 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 AKIRIN1Q9H9L7 192 aaPredicted RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 FRRS1LQ9P0K9 344 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 PAIP2BQ9ULR5 123 aaKnown RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 AK6Q9Y3D8 172 aaKnown RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 ACOD1A6NK06 481 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 RPP14O95059 124 aaKnown RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 TFPIP10646 304 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 SNRPBP14678 240 aaKnown RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 INPP1P49441 399 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 INSM1Q01101 510 aaPredicted RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 PLET1Q6UQ28 207 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 BMPERQ8N8U9 685 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 RFT1Q96AA3 541 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 C8orf44Q96CB5 159 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 GFI1Q99684 422 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 SMAD5Q99717 465 aaKnown RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 NPAS1Q99742 590 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 BRD7Q9NPI1 651 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 GPN3Q9UHW5 284 aaPredicted RBP17.75■□□□□ 0.43
CLIP3-206ENST00000593074 TEKT2Q9UIF3 430 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 SPATA2Q9UM82 520 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 B9D1Q9UPM9 204 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 A0A087WV48 116 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 IGLV1-36A0A0B4J1U3 117 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 A0A0B4J203 849 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 ETV2O00321 342 aaPredicted RBP17.74■□□□□ 0.43
CLIP3-206ENST00000593074 OR6A2O95222 327 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 LDOC1O95751 146 aaPredicted RBP17.74■□□□□ 0.43
CLIP3-206ENST00000593074 GPANK1O95872 356 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 KLK3P07288 261 aaPredicted RBP17.74■□□□□ 0.43
CLIP3-206ENST00000593074 APOBEC1P41238 236 aaKnown RBP17.74■□□□□ 0.43
CLIP3-206ENST00000593074 CENPAP49450 140 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 ZBTB44Q8NCP5 570 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 OR5AK2Q8NH90 309 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 ABHD1Q96SE0 405 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 TSPAN10Q9H1Z9 355 aaPredicted RBP17.74■□□□□ 0.43
CLIP3-206ENST00000593074 NXT1Q9UKK6 140 aaKnown RBP17.74■□□□□ 0.43
CLIP3-206ENST00000593074 IKZF2Q9UKS7 526 aa17.74■□□□□ 0.43
CLIP3-206ENST00000593074 ZDBF2Q9HCK1 2354 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 C2orf72A6NCS6 295 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 HMX3A6NHT5 357 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 PDCD5O14737 125 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 TMEM127O75204 238 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 ZFAND5O76080 213 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 ZNF28P17035 718 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 NR4A2P43354 598 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 BLVRAP53004 296 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 MC2RQ01718 297 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 KCNJ8Q15842 424 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 Q499Y3 187 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 RSBN1Q5VWQ0 802 aaPredicted RBP17.73■□□□□ 0.43
CLIP3-206ENST00000593074 LYPD8Q6UX82 237 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 CMTM3Q96MX0 182 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 THAP7Q9BT49 309 aaPredicted RBP17.73■□□□□ 0.43
CLIP3-206ENST00000593074 WDR54Q9H977 334 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 ANKRD10Q9NXR5 420 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 MYOTQ9UBF9 498 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 ZNF221Q9UK13 617 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 TRBV5-5A0A0J9YX44 114 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 AIPO00170 330 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 LANCL1O43813 399 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 ITGA10O75578 1167 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 SP9P0CG40 484 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 CCL4P13236 92 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 MAPK3P27361 379 aaPredicted RBP17.73■□□□□ 0.43
CLIP3-206ENST00000593074 RPS27P42677 84 aaKnown RBP17.73■□□□□ 0.43
CLIP3-206ENST00000593074 HACD4Q5VWC8 232 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 ZNF57Q68EA5 555 aaPredicted RBP17.73■□□□□ 0.43
CLIP3-206ENST00000593074 HDHD2Q9H0R4 259 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 KCNG2Q9UJ96 466 aa17.73■□□□□ 0.43
CLIP3-206ENST00000593074 A0A1B0GVC2 190 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 FAM240BA0A1B0GVZ2 78 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 SLC22A23A1A5C7 686 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 A6NIN4 97 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 OR4C45A6NMZ5 311 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 UBL3O95164 117 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 DDOSTP39656 456 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 CLDN20P56880 219 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 PUDPQ08623 228 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 ZP4Q12836 540 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 MFSD13AQ14CX5 517 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 ZNF528Q3MIS6 628 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 ATAD3CQ5T2N8 411 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 FAM199XQ6PEV8 388 aaPredicted RBP17.72■□□□□ 0.43
CLIP3-206ENST00000593074 ARSKQ6UWY0 536 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 DTX3Q8N9I9 347 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 OR2G2Q8NGZ5 317 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 MFSD8Q8NHS3 518 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 LGALS14Q8TCE9 139 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 ORAI1Q96D31 301 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 AMELYQ99218 206 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 SLC25A18Q9H1K4 315 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 MED11Q9P086 117 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 PCDHGA9Q9Y5G4 932 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms