RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	SEMA6D	Q8NFY4	1073 aa		13.22	□□□□□ -0.29
RFX2-223	ENST00000592883	SPDL1	Q96EA4	605 aa		13.22	□□□□□ -0.29
RFX2-223	ENST00000592883	TMEM43	Q9BTV4	400 aa		13.22	□□□□□ -0.29
RFX2-223	ENST00000592883	SLC52A3	Q9NQ40	469 aa		13.22	□□□□□ -0.29
RFX2-223	ENST00000592883	CCDC167	Q9P0B6	97 aa		13.22	□□□□□ -0.29
RFX2-223	ENST00000592883	TRBV5-3	A0A0A0MS03	114 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883		A0A1W2PPW3	197 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	PRORSD1P	A6NEY8	169 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883		M0R3H8	397 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	RGS9	O75916	674 aa	Predicted RBP	13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	GAA	P10253	952 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	SLC6A2	P23975	617 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	CFP	P27918	469 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	MAGEB1	P43366	347 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	THSD4	Q6ZMP0	1018 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	DEF8	Q6ZN54	512 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	ARMC8	Q8IUR7	673 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	SMYD1	Q8NB12	490 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	OR5J2	Q8NH18	312 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	TMEM54	Q969K7	222 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	LRRC37B	Q96QE4	947 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	ZNF607	Q96SK3	696 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	EBF4	Q9BQW3	602 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	TMEM38A	Q9H6F2	299 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	TCF7L2	Q9NQB0	619 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	SLC7A8	Q9UHI5	535 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	SLC13A4	Q9UKG4	626 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	TENM1	Q9UKZ4	2725 aa		13.21	□□□□□ -0.29
RFX2-223	ENST00000592883	POLR3G	O15318	223 aa	Predicted RBP	13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	PPIH	O43447	177 aa	Known RBP	13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	RP2	O75695	350 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	MFN2	O95140	757 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	CLPTM1	O96005	669 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	TF	P02787	698 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	SERPINA5	P05154	406 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	MSMB	P08118	114 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	FAM157B	P0CG42	384 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	CCL2	P13500	99 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	GPX2	P18283	190 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	PPIB	P23284	216 aa	Known RBP	13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	TMEM33	P57088	247 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	LMO4	P61968	165 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	MELK	Q14680	651 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	REP15	Q6BDI9	236 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	LINC00114	Q6XXX2	140 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	SLC35D2	Q76EJ3	337 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	SLC22A24	Q8N4F4	322 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	TLCD1	Q96CP7	247 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	TSPAN32	Q96QS1	320 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	MCHR1	Q99705	422 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	SH3GL3	Q99963	347 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	OR51B6	Q9H340	312 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	GLTP	Q9NZD2	209 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	FBXL3	Q9UKT7	428 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	GRIP1	Q9Y3R0	1128 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883	GMEB1	Q9Y692	573 aa		13.2	□□□□□ -0.3
RFX2-223	ENST00000592883		A0A0A6YYJ9	748 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	CDC14B	O60729	498 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	SERPINB7	O75635	380 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	OR6A2	O95222	327 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	MT-ATP6	P00846	226 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	OPN1SW	P03999	348 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	THY1	P04216	161 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	LSP1	P33241	339 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	IDH3A	P50213	366 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	ERVS71-1	P61550	626 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	MRPS11	P82912	194 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	RUNX1T1	Q06455	604 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	NPTX1	Q15818	432 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	SWT1	Q5T5J6	900 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	ZNF613	Q6PF04	617 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	LRFN4	Q6PJG9	635 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	HIPK4	Q8NE63	616 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	SLC30A7	Q8NEW0	376 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	OR6X1	Q8NH79	312 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	ARHGDIG	Q99819	225 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	PLA2G12A	Q9BZM1	189 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	ZNF385D	Q9H6B1	395 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	TMBIM4	Q9HC24	238 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	TMEM38B	Q9NVV0	291 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	TAS2R5	Q9NYW4	299 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	TAAR3P	Q9P1P4	343 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	ZNF346	Q9UL40	294 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	ARHGAP32	A7KAX9	2087 aa		13.19	□□□□□ -0.3
RFX2-223	ENST00000592883	CPSF4L	A6NMK7	179 aa	Known RBP	13.18	□□□□□ -0.3
RFX2-223	ENST00000592883	EVPLL	A8MZ36	301 aa		13.18	□□□□□ -0.3
RFX2-223	ENST00000592883	RNF13	O43567	381 aa		13.18	□□□□□ -0.3
RFX2-223	ENST00000592883	CHP2	O43745	196 aa		13.18	□□□□□ -0.3
RFX2-223	ENST00000592883	ZNF500	O60304	480 aa	Predicted RBP	13.18	□□□□□ -0.3
RFX2-223	ENST00000592883	LYPD3	O95274	346 aa		13.18	□□□□□ -0.3
RFX2-223	ENST00000592883	CH25H	O95992	272 aa		13.18	□□□□□ -0.3
RFX2-223	ENST00000592883	OR8G3P	P0DMU2	310 aa		13.18	□□□□□ -0.3
RFX2-223	ENST00000592883	ZNF74	Q16587	644 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms