RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 DND1Q8IYX4 353 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 GABRG1Q8N1C3 465 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 LILRA3Q8N6C8 439 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 DTWD2Q8NBA8 298 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CCDC54Q8NEL0 328 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 BBS1Q8NFJ9 593 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR4K17Q8NGC6 315 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR11H7Q8NGC8 314 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR1J2Q8NGS2 313 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PTP4A1Q93096 173 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 WBP2Q969T9 261 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MRGPRX3Q96LB0 322 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SPIN2AQ99865 258 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SPIN2BQ9BPZ2 258 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TTTY10Q9BZA0 68 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 QRSL1Q9H0R6 528 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 C11orf49Q9H6J7 331 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CHMP1AQ9HD42 196 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 PRDM7Q9NQW5 492 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 FAM212BQ9NTI7 297 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 C2orf42Q9NWW7 574 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 HRASLS2Q9NWW9 162 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 COQ3Q9NZJ6 369 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GMEB2Q9UKD1 530 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PLEKHM1Q9Y4G2 1056 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR5H14A6NHG9 310 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 A6NIN4 97 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 EEF1E1-BLOC1S5C9J1V9 151 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC17A2O00624 439 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 BHLHE40O14503 412 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TNFRSF10CO14798 259 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC31A1O15431 190 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 BRINP1O60477 761 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 B4GALT3O60512 393 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 HRGP04196 525 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CSN2P05814 226 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 HCKP08631 526 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GABRA1P14867 456 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ANXA7P20073 488 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 P2RY2P41231 377 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 RPL35P42766 123 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 POU3F4P49335 361 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR10A3P58181 314 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 RAB1AP62820 205 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 VAMP2P63027 116 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GRM7Q14831 915 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MPEG1Q2M385 716 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 DEFB115Q30KQ5 88 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC25A35Q3KQZ1 300 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 EOGTQ5NDL2 527 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MRM1Q6IN84 353 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 ZNF585AQ6P3V2 769 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ANKRD16Q6P6B7 361 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TMEM65Q6PI78 240 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PAPD4Q6PIY7 484 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 B3GLCTQ6Y288 498 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MDGA2Q7Z553 956 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GLCCI1Q86VQ1 547 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PARGQ86W56 976 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MEX3DQ86XN8 651 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 MCATQ8IVS2 390 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 SGPP2Q8IWX5 399 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC22A24Q8N4F4 322 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CCDC71LQ8N9Z2 235 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR52R1Q8NGF1 315 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR56B1Q8NGI3 324 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR5M9Q8NGP3 310 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OR2A1Q8NGT9 310 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CNRIP1Q96F85 164 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 TRMT61AQ96FX7 289 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC25A44Q96H78 314 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC46A1Q96NT5 459 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PFDN5Q99471 154 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 OCSTAMPQ9BR26 566 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TEX101Q9BY14 249 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 POFUT1Q9H488 388 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 NCOR1P1Q9H4R4 102 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 MOB1AQ9H8S9 216 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SFXN1Q9H9B4 322 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ELL3Q9HB65 397 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 EXOSC3Q9NQT5 275 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 CENPMQ9NSP4 180 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SERTAD3Q9UJW9 196 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 NPTNQ9Y639 398 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 POLR2AP24928 1970 aaKnown RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 TRIP12Q14669 1992 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 SCN8AQ9UQD0 1980 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SCN10AQ9Y5Y9 1956 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TRAV36DV7A0A075B6V5 113 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 A0A0B4J2E0 115 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 A0A1B0GX12 115 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ZNF726A6NNF4 738 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ZNF878C9JN71 531 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CTNSO60931 367 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SLC2A10O95528 541 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 WNT1P04628 370 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GYPBP06028 91 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CTSLP07711 333 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 POU2F2P09086 479 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms