RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 OR4K5Q8NGD3 323 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 FGFBP3Q8TAT2 258 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 HDAC2Q92769 488 aaKnown RBP10.06□□□□□ -0.8
VMP1-211ENST00000591315 ULBP2Q9BZM5 246 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 C1orf21Q9H246 121 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 ESRP2Q9H6T0 727 aaKnown RBP10.06□□□□□ -0.8
VMP1-211ENST00000591315 IL1RAPQ9NPH3 570 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 GLTPQ9NZD2 209 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 IL20RAQ9UHF4 553 aa10.06□□□□□ -0.8
VMP1-211ENST00000591315 IGHV1-18A0A0C4DH31 117 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 A0A1W2PRG6 482 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 SH3PXD2BA1X283 911 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 MCIDASD6RGH6 385 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 IMPA2O14732 288 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 GYG2O15488 501 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 TRMUO75648 421 aaKnown RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 HLA-HP01893 362 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 RAF1P04049 648 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 B4GALT1P15291 398 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 DNASE1P24855 282 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 RRM2P31350 389 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 LIMS1P48059 325 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ART1P52961 327 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 NR1H2P55055 460 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 FXYD6P3P58550 94 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 CTXN1P60606 82 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ERVK-25P63136 954 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 FMODQ06828 376 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 DBPQ10586 325 aaPredicted RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 KEAP1Q14145 624 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ALG10Q5BKT4 473 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 LCE2DQ5TA82 110 aaPredicted RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 ANKRD16Q6P6B7 361 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ZNF813Q6ZN06 617 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 TMPRSS11FQ6ZWK6 438 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ABHD12BQ7Z5M8 362 aaPredicted RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 ZER1Q7Z7L7 766 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 OAFQ86UD1 273 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 RNF113BQ8IZP6 322 aaKnown RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 ARHGAP24Q8N264 748 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ZNF566Q969W8 418 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 MCUR1Q96AQ8 359 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 SLC25A44Q96H78 314 aaPredicted RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 LRR1Q96L50 414 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 TSPAN32Q96QS1 320 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 USB1Q9BQ65 265 aaKnown RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 BTBD10Q9BSF8 475 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 CADM1Q9BY67 442 aaKnown RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 MRPL13Q9BYD1 178 aaKnown RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 ANKRD19PQ9H560 264 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 NGBQ9NPG2 151 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ZNF224Q9NZL3 707 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ZNF346Q9UL40 294 aaKnown RBP10.05□□□□□ -0.8
VMP1-211ENST00000591315 POFUT2Q9Y2G5 429 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 AMDHD2Q9Y303 409 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ADAM18Q9Y3Q7 739 aa10.05□□□□□ -0.8
VMP1-211ENST00000591315 ZNF469Q96JG9 3925 aaPredicted RBP10.04□□□□□ -0.8
VMP1-211ENST00000591315 ZNF99A8MXY4 864 aaPredicted RBP10.04□□□□□ -0.8
VMP1-211ENST00000591315 E7EQL1 145 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 H7C1C5 153 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 HS3ST1O14792 307 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 PTP4A3O75365 173 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 GADD45GO95257 159 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 SLC2A10O95528 541 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 SOD3P08294 240 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 QDPRP09417 244 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 ACADSP16219 412 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 UBE2NP61088 152 aaKnown RBP10.04□□□□□ -0.8
VMP1-211ENST00000591315 LCN6P62502 163 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 PIGFQ07326 219 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 ZNF672Q499Z4 452 aaPredicted RBP10.04□□□□□ -0.8
VMP1-211ENST00000591315 ZBED5Q49AG3 693 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 RRM2BQ7LG56 351 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 PIWIL3Q7Z3Z3 882 aaKnown RBP10.04□□□□□ -0.8
VMP1-211ENST00000591315 MDP1Q86V88 176 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 SKA3Q8IX90 412 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 ADGRG5Q8IZF4 528 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 C17orf78Q8N4C9 275 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 IGFBPL1Q8WX77 278 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 MCHR2Q969V1 340 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 NMD3Q96D46 503 aaKnown RBP10.04□□□□□ -0.8
VMP1-211ENST00000591315 BOD1Q96IK1 185 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 RSRC1Q96IZ7 334 aaKnown RBP10.04□□□□□ -0.8
VMP1-211ENST00000591315 Q96M85 177 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 ADAD1Q96M93 576 aaKnown RBP10.04□□□□□ -0.8
VMP1-211ENST00000591315 ALPK1Q96QP1 1244 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 KATNB1Q9BVA0 655 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 TXNIPQ9H3M7 391 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 ZANQ9Y493 2812 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 ARFGEF3Q5TH69 2177 aa10.04□□□□□ -0.8
VMP1-211ENST00000591315 ARPC4-TTLL3A0A0A6YYG9 625 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 UNC119BA6NIH7 251 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 ATP6V1G2-DDX39BF2Z307 99 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 GSC2O15499 205 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 DHHO43323 396 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 IGHG1P01857 330 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 CECR9P0C854 216 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 ITGA2P17301 1181 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 CALCRP30988 508 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms