RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 DYRK1AQ13627 763 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 ZIC1Q15915 447 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 LINC00346Q8IVM7 164 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF565Q8N9K5 539 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 ELSPBP1Q96BH3 223 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 SFXN2Q96NB2 322 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 APMAPQ9HDC9 416 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 CTHP32929 405 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 RPS27P42677 84 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 CD300LFQ8TDQ1 290 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 MR1Q95460 341 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 GPNMBQ14956 572 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 WDR81Q562E7 1941 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 GPR171O14626 319 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 SDHAP31040 664 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 TMUB2Q71RG4 321 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 GSX2Q9BZM3 304 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 CDCP1Q9H5V8 836 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 FBXO34Q9NWN3 711 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 H7C417 338 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 ATF1P18846 271 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 PER3P56645 1201 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 EXOSC2Q13868 293 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 TMPRSS11FQ6ZWK6 438 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 POFUT1Q9H488 388 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 RARRES3Q9UL19 164 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 HS3ST3A1Q9Y663 406 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 MYO9BQ13459 2157 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 PLPP2O43688 288 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 GIPP09681 153 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 ADH6P28332 368 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 FCRL6Q6DN72 434 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF770Q6IQ21 691 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 SHDQ96IW2 340 aa15.67■□□□□ 0.1
SMARCA4-215ENST00000590574 GALP22466 123 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 CD38P28907 300 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 STX12Q86Y82 276 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF454Q8N9F8 522 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 C17orf47Q8NEP4 570 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 C16orf52Q8NHV5 167 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 ARL11Q969Q4 196 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 LMAN1LQ9HAT1 526 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 KLK11Q9UBX7 282 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 LSM2Q9Y333 95 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 F5H5K5 113 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 PRICKLE3O43900 615 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 MSL3P1P0C860 447 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 TMEM196Q5HYL7 178 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 CLVS2Q5SYC1 327 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 STAC2Q6ZMT1 411 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 FRMD1Q8N878 549 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 OR14A16Q8NHC5 309 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 SMIM4Q8WVI0 70 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 VRK1Q99986 396 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 CGGBP1Q9UFW8 167 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 GLS2Q9UI32 602 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 RPH3AQ9Y2J0 694 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 BORCS7-ASMTA0A0B4J1R7 106 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 A0A0D9SG52 128 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 A0A1W2PPV9 198 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 hCG_1807616A0A1W2PRN6 198 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 P2RY10O00398 339 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF28P17035 718 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 DRD3P35462 400 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 LBX1P52954 281 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 EMP2P54851 167 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 RFPL4BQ6ZWI9 263 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 PAQR8Q8TEZ7 354 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF764Q96H86 408 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 ADGRL4Q9HBW9 690 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 FBXL4Q9UKA2 621 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 A0A0B4J2E0 115 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 A0A1B0GX12 115 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 E9PI62 339 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 GLYR1Q49A26 553 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 SLC25A30Q5SVS4 291 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 THSD4Q6ZMP0 1018 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 MARVELD1Q9BSK0 173 aa15.66■□□□□ 0.1
SMARCA4-215ENST00000590574 CTSVO60911 334 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 TMEM225BP0DP42 221 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 HSD17B7P56937 341 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 SLC22A6Q4U2R8 563 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 VSX1Q9NZR4 365 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 OR2W5A6NFC9 320 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 PLA2G10O15496 165 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 CD1CP29017 333 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 DCTDP32321 178 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 ZBTB37Q5TC79 503 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 OTPQ5XKR4 325 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 CNTNAP3BQ96NU0 1288 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF160Q9HCG1 818 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF346Q9UL40 294 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 LILRB5O75023 590 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 TPOP07202 933 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 UBE2MP61081 183 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 TEX261Q6UWH6 196 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 ARSKQ6UWY0 536 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 ETFBKMTQ8IXQ9 262 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 OR13C9Q8NGT0 318 aa15.65■□□□□ 0.1
SMARCA4-215ENST00000590574 U3KQ87 197 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms