RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TMEM108Q6UXF1 575 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 TSEN54Q7Z6J9 526 aaKnown RBP9.78□□□□□ -0.84
SMAD4-211ENST00000590499 OFCC1Q8IZS5 231 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 ANKS4BQ8N8V4 417 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 PIK3C3Q8NEB9 887 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 PFN4Q8NHR9 129 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 TMEM239Q8WW34 195 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 LIPHQ8WWY8 451 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 GEMIN6Q8WXD5 167 aaKnown RBP9.78□□□□□ -0.84
SMAD4-211ENST00000590499 LZICQ8WZA0 190 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 RADILQ96JH8 1075 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 LRR1Q96L50 414 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 KCTD14Q9BQ13 255 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-211ENST00000590499 EMC6Q9BV81 110 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 CRLF2Q9HC73 371 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 ARL8BQ9NVJ2 186 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 MAGED1Q9Y5V3 778 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-211ENST00000590499 ARFGEF3Q5TH69 2177 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 NIPBLQ6KC79 2804 aaeCLIP9.77□□□□□ -0.85
SMAD4-211ENST00000590499 NSD1Q96L73 2696 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-211ENST00000590499 C11orf98E9PRG8 122 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 OVOL3O00110 214 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 DCTN3O75935 186 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 OR7A10O76100 309 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 SERPINA1P01009 418 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 IFNW1P05000 195 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 IFNGR1P15260 489 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 NCK1P16333 377 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 AHCYP23526 432 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 PTH2RP49190 550 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 CDH11P55287 796 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 NKX6-1P78426 367 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-211ENST00000590499 ARF1P84077 181 aaKnown RBP9.77□□□□□ -0.85
SMAD4-211ENST00000590499 IL1RL1Q01638 556 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 ST3GAL3Q11203 375 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 CEACAM16Q2WEN9 425 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 IFI44LQ53G44 452 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 Q5PR19 223 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 SHEQ5VZ18 495 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 CDPF1Q6NVV7 123 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 KLHL24Q6TFL4 600 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 PRSS57Q6UWY2 283 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 B3GLCTQ6Y288 498 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF627Q7L945 461 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 DTX2Q86UW9 622 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 GPR137CQ8N3F9 429 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 RBM15BQ8NDT2 890 aaKnown RBP9.77□□□□□ -0.85
SMAD4-211ENST00000590499 SMAP2Q8WU79 429 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-211ENST00000590499 FBLIM1Q8WUP2 373 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 TMEM171Q8WVE6 324 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 HS6ST2Q96MM7 605 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 LRRC37BQ96QE4 947 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 CCT8L2Q96SF2 557 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 C1QTNF6Q9BXI9 259 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 FAM53CQ9NYF3 392 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 CRNNQ9UBG3 495 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-211ENST00000590499 TAGLN3Q9UI15 199 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 MGAT4BQ9UQ53 548 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 LAMP3Q9UQV4 416 aa9.77□□□□□ -0.85
SMAD4-211ENST00000590499 CSPG4Q6UVK1 2322 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 IGHV1-18A0A0C4DH31 117 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF503-AS2A6NEH8 195 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF99A8MXY4 864 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-211ENST00000590499 E7EQL1 145 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 J3KTA2 159 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 M0R1B8 84 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 M0R3G1 203 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 GSTA4O15217 222 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 PIP5K1CO60331 668 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 OR6A2O95222 327 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF682O95780 498 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 IGLV1-44P01699 117 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 CD8AP01732 235 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 HSD17B1P14061 328 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 CD99P14209 185 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 PAX7P23759 505 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 YAP1P46937 504 aaKnown RBP9.76□□□□□ -0.85
SMAD4-211ENST00000590499 BIDP55957 195 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 RPS4XP62701 263 aaKnown RBP9.76□□□□□ -0.85
SMAD4-211ENST00000590499 RPL18Q07020 188 aaKnown RBP9.76□□□□□ -0.85
SMAD4-211ENST00000590499 CAMK2DQ13557 499 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 C3orf36Q3SXR2 165 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 CARD17Q5XLA6 110 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 SLC35D2Q76EJ3 337 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 NANOGNBQ7Z5D8 188 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 PGAM4Q8N0Y7 254 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 FAM169BQ8N8A8 192 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 OR6X1Q8NH79 312 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 TMEM54Q969K7 222 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 SGTBQ96EQ0 304 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 PERPQ96FX8 193 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 ADAD1Q96M93 576 aaKnown RBP9.76□□□□□ -0.85
SMAD4-211ENST00000590499 SEPHS2Q99611 448 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 TRAF4Q9BUZ4 470 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-211ENST00000590499 CXorf56Q9H5V9 222 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 CISD1Q9NZ45 108 aaKnown RBP9.76□□□□□ -0.85
SMAD4-211ENST00000590499 ADA2Q9NZK5 511 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 CD300AQ9UGN4 299 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 MED31Q9Y3C7 131 aa9.76□□□□□ -0.85
SMAD4-211ENST00000590499 RTTNQ86VV8 2226 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms