RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 NOXO1Q8NFA2 376 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 OR9Q2Q8NGE9 314 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 OR52N5Q8NH56 324 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 TMEM54Q969K7 222 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 PIK3IP1Q96FE7 263 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 CLEC4MQ9H2X3 399 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-212ENST00000590096 SLC17A5Q9NRA2 495 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 VNN3Q9NY84 501 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 GLTPQ9NZD2 209 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 POFUT2Q9Y2G5 429 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 AMDHD2Q9Y303 409 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF99A8MXY4 864 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-212ENST00000590096 CENPBD1B2RD01 187 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 PTP4A3O75365 173 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 CD14P08571 375 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 ACVR1BP36896 505 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 ARF1P84077 181 aaKnown RBP18.69■□□□□ 0.58
ATG4D-212ENST00000590096 ARMC4Q5T2S8 1044 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 ANKRD16Q6P6B7 361 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 SMARCD3Q6STE5 483 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 PAPD5Q8NDF8 572 aaKnown RBP18.69■□□□□ 0.58
ATG4D-212ENST00000590096 FANK1Q8TC84 345 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 GPA33Q99795 319 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 KATNB1Q9BVA0 655 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 GRHPRQ9UBQ7 328 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF346Q9UL40 294 aaKnown RBP18.69■□□□□ 0.58
ATG4D-212ENST00000590096 ABCA12Q86UK0 2595 aa18.69■□□□□ 0.58
ATG4D-212ENST00000590096 DCHS2Q6V1P9 2916 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 A0A1W2PR80 420 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 A6NIZ1 184 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 DEFB108AA8MXU0 73 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 E2F6O75461 281 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 TRMUO75648 421 aaKnown RBP18.68■□□□□ 0.58
ATG4D-212ENST00000590096 WNT11O96014 354 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 HRGP04196 525 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 NR2C1P13056 603 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 NR1H2P55055 460 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 UBE2NP61088 152 aaKnown RBP18.68■□□□□ 0.58
ATG4D-212ENST00000590096 RAP1BP61224 184 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 RAP1AP62834 184 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 ERVK-25P63136 954 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 RUNX1T1Q06455 604 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 TSPAN31Q12999 210 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 MICAQ29983 383 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 TBRG1Q3YBR2 411 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 HIKESHIQ53FT3 197 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 C1QTNF12Q5T7M4 302 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 SYT14Q8NB59 555 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF837Q96EG3 531 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-212ENST00000590096 BOD1Q96IK1 185 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 TSPAN32Q96QS1 320 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 MAGED1Q9Y5V3 778 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-212ENST00000590096 SLC25A15Q9Y619 301 aa18.68■□□□□ 0.58
ATG4D-212ENST00000590096 A0A096LPE4 126 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-212ENST00000590096 A0A1W2PPZ6 126 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 SIAH2O43255 324 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 QDPRP09417 244 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF26P17031 533 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-212ENST00000590096 GSSP48637 474 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 CD47Q08722 323 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 WDR31Q8NA23 367 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 AQP11Q8NBQ7 271 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 MAGEE2Q8TD90 523 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-212ENST00000590096 BCL2L2Q92843 193 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-212ENST00000590096 UTP4Q969X6 686 aaKnown RBP18.67■□□□□ 0.58
ATG4D-212ENST00000590096 SLCO4A1Q96BD0 722 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 PLPPR2Q96GM1 343 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 GPX7Q96SL4 187 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-212ENST00000590096 MRPL13Q9BYD1 178 aaKnown RBP18.67■□□□□ 0.58
ATG4D-212ENST00000590096 ESRP2Q9H6T0 727 aaKnown RBP18.67■□□□□ 0.58
ATG4D-212ENST00000590096 OBP2BQ9NPH6 170 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 DNAJB9Q9UBS3 223 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 ADAM18Q9Y3Q7 739 aa18.67■□□□□ 0.58
ATG4D-212ENST00000590096 PRR14LQ5THK1 2151 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 ABCA4P78363 2273 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 XKRYO14609 159 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 DEAF1O75398 565 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-212ENST00000590096 HOXB1P14653 301 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-212ENST00000590096 MYBPC1Q00872 1141 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 CCNIQ14094 377 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 HIST3H3Q16695 136 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF770Q6IQ21 691 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-212ENST00000590096 KLHL17Q6TDP4 642 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 THSD4Q6ZMP0 1018 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF813Q6ZN06 617 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 DPY19L2P2Q6ZN68 376 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 CDC20BQ86Y33 519 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 ARIH2OSQ8N7S6 290 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 OR10G2Q8NGC3 310 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 GIPC3Q8TF64 312 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 HDAC2Q92769 488 aaKnown RBP18.66■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF570Q96NI8 536 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 FOXB1Q99853 325 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 ALG12Q9BV10 488 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 OR52D1Q9H346 318 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 IL20RAQ9UHF4 553 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 MGAT4BQ9UQ53 548 aa18.66■□□□□ 0.58
ATG4D-212ENST00000590096 DHHO43323 396 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 TIPRLO75663 272 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms