RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 RELL2Q8NC24 303 aaPredicted RBP12.05□□□□□ -0.48
VMP1-210ENST00000589823 NOXO1Q8NFA2 376 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 ZNF519Q8TB69 540 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 ITLN2Q8WWU7 325 aaPredicted RBP12.05□□□□□ -0.48
VMP1-210ENST00000589823 RASD2Q96D21 266 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 LRRC46Q96FV0 321 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 LRR1Q96L50 414 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 SLC29A1Q99808 456 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 LINC00470Q9BZP3 86 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 RIBC2Q9H4K1 309 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 SLC7A10Q9NS82 523 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 MYO7BQ6PIF6 2116 aa12.05□□□□□ -0.48
VMP1-210ENST00000589823 A8MXE2 369 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 CENPBD1B2RD01 187 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 ARHGEF9O43307 516 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 CLDN14O95500 239 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 PGA4P0DJD7 388 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 PGA3P0DJD8 388 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 GIPRP48546 466 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 ASCL1P50553 236 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 MYBPC1Q00872 1141 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 CD47Q08722 323 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 FAPQ12884 760 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 NPRL3Q12980 569 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 ITGADQ13349 1161 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 FBXW9Q5XUX1 488 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 ADCK1Q86TW2 530 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 C20orf196Q8IYI0 205 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 LNX2Q8N448 690 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 GALNT4Q8N4A0 578 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 IQCF1Q8N6M8 205 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 SYT14Q8NB59 555 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 OR4Q3Q8NH05 313 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 FNDC8Q8TC99 324 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 HDAC2Q92769 488 aaKnown RBP12.04□□□□□ -0.48
VMP1-210ENST00000589823 ALG12Q9BV10 488 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 RBM24Q9BX46 236 aaKnown RBP12.04□□□□□ -0.48
VMP1-210ENST00000589823 GABARAPL3Q9BY60 117 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 PRRG3Q9BZD7 231 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 ULBP2Q9BZM5 246 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 VCX3BQ9H321 246 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 SLC25A19Q9HC21 320 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 KCNJ16Q9NPI9 418 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 ASB6Q9NWX5 421 aa12.04□□□□□ -0.48
VMP1-210ENST00000589823 ZNF587BE7ETH6 402 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 M0R3G1 203 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 AHCYL1O43865 530 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 UPK3AO75631 287 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 RENP00797 406 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 IFNGP01579 166 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 HMGN1P05114 100 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 HIST1H1CP16403 213 aaKnown RBP12.03□□□□□ -0.48
VMP1-210ENST00000589823 EDNRAP25101 427 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 GRK5P34947 590 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 CDK5Q00535 292 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 RUNX1T1Q06455 604 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 PTGES3Q15185 160 aaKnown RBP12.03□□□□□ -0.48
VMP1-210ENST00000589823 ZIK1Q3SY52 487 aaPredicted RBP12.03□□□□□ -0.48
VMP1-210ENST00000589823 MESTQ5EB52 335 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 TMEM236Q5W0B7 351 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 Q6ZT83 130 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 WDFY1Q8IWB7 410 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 OR52E2Q8NGJ4 325 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 OR4K13Q8NH42 304 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 SSC4DQ8WTU2 575 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 TMEM54Q969K7 222 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 RDH12Q96NR8 316 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 ALKBH3Q96Q83 286 aaPredicted RBP12.03□□□□□ -0.48
VMP1-210ENST00000589823 RBP7Q96R05 134 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 MRPL13Q9BYD1 178 aaKnown RBP12.03□□□□□ -0.48
VMP1-210ENST00000589823 ELOVL5Q9NYP7 299 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 GLTPQ9NZD2 209 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 JKAMPQ9P055 326 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 MALT1Q9UDY8 824 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 KLHL21Q9UJP4 597 aa12.03□□□□□ -0.48
VMP1-210ENST00000589823 FOXD3Q9UJU5 478 aaPredicted RBP12.03□□□□□ -0.48
VMP1-210ENST00000589823 HIVEP3Q5T1R4 2406 aa12.02□□□□□ -0.48
VMP1-210ENST00000589823 PRSS37A4D1T9 235 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 NKX2-6A6NCS4 301 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 RIIAD1A6NNX1 92 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 ZAR1LA6NP61 321 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 QDPRP09417 244 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 MPGP29372 298 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 ROR2Q01974 943 aaKnown RBP12.02□□□□□ -0.49
VMP1-210ENST00000589823 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.02□□□□□ -0.49
VMP1-210ENST00000589823 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 THEM4Q5T1C6 240 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 ACSM5Q6NUN0 579 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 LEG1Q6P5S2 330 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 ZNF474Q6S9Z5 364 aaPredicted RBP12.02□□□□□ -0.49
VMP1-210ENST00000589823 SDR9C7Q8NEX9 313 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 PLEKHA8Q96JA3 519 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 SLC38A2Q96QD8 506 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 TOR3AQ9H497 397 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 GPR35Q9HC97 309 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 CMC2Q9NRP2 79 aa12.02□□□□□ -0.49
VMP1-210ENST00000589823 SMPD3Q9NY59 655 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms