RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ZNF160Q9HCG1 818 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 MGAT4AQ9UM21 535 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 POLHQ9Y253 713 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SESN1Q9Y6P5 492 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 A0A1B0GW55 424 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 ARRDC5A6NEK1 342 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SEMA7AO75326 666 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 DUX4L2P0CJ85 424 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 DUX4L3P0CJ86 424 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 DUX4L4P0CJ87 422 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 DUX4L5P0CJ88 424 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 DUX4L6P0CJ89 424 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 DUX4L7P0CJ90 424 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 ANXA3P12429 323 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 GLULP15104 373 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SLC25A24Q6NUK1 477 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 FAM57BQ71RH2 274 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SIAH3Q8IW03 269 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 GPR137CQ8N3F9 429 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 ASB12Q8WXK4 309 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 HSD17B8Q92506 261 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 MCCC2Q9HCC0 563 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 DUX4Q9UBX2 424 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 ALG5Q9Y673 324 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 THSD7BQ9C0I4 1608 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 HTR3EA5X5Y0 456 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 ZNF28P17035 718 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 GDNFP39905 211 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 UBE2IP63279 158 aaKnown RBP13.27□□□□□ -0.28
RETREG3-208ENST00000589797 DGCR2P98153 550 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 IFITM3Q01628 133 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 GALNT11Q8NCW6 608 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 OR5T2Q8NGG2 359 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 ZNF486Q96H40 463 aaPredicted RBP13.27□□□□□ -0.28
RETREG3-208ENST00000589797 C10orf90Q96M02 699 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 PADI1Q9ULC6 663 aa13.27□□□□□ -0.28
RETREG3-208ENST00000589797 FITM1A5D6W6 292 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 S100A1P23297 94 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 EVI2BP34910 448 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 DIO1P49895 249 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 RNF4P78317 190 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 GPR50Q13585 617 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 SF3A2Q15428 464 aaKnown RBP13.27□□□□□ -0.29
RETREG3-208ENST00000589797 GLYATL3Q5SZD4 288 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 TMEM53Q6P2H8 277 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 OR7G1Q8NGA0 311 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 CCDC74BQ96LY2 380 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 NRIP3Q9NQ35 241 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 UPB1Q9UBR1 384 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 OIP5O43482 229 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 RFPL3O75679 317 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 ERGP11308 486 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 LCN1P31025 176 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 ZNF84P51523 738 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 ALKBH1Q13686 389 aaKnown RBP13.27□□□□□ -0.29
RETREG3-208ENST00000589797 AGAP7PQ5VUJ5 663 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 TAAR8Q969N4 342 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 GIMAP5Q96F15 307 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 CHRNA9Q9UGM1 479 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 SCP2D1Q9UJQ7 156 aa13.27□□□□□ -0.29
RETREG3-208ENST00000589797 A0A087WUJ7 227 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 EEF1E1-BLOC1S5C9J1V9 151 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 I3L521 148 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 CRTAPO75718 401 aaPredicted RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 LDOC1O95751 146 aaPredicted RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 SCGB1D2O95969 90 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 DAP3P51398 398 aaKnown RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 PER3P56645 1201 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 MFSD13AQ14CX5 517 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 ETFDHQ16134 617 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 PWWP2BQ6NUJ5 590 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 RPS19BP1Q86WX3 136 aaKnown RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 FGGYQ96C11 551 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 WWTR1Q9GZV5 400 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 INPP5EQ9NRR6 644 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 RBFOX1Q9NWB1 397 aaKnown RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 QPCTLQ9NXS2 382 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 CSF3P09919 207 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 CDKN2AP42771 156 aaKnown RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 CSNK1A1P48729 337 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 NXPH1P58417 271 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 ZNF117Q03924 483 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 FMODQ06828 376 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 Q499Y3 187 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 RNASE10Q5GAN6 216 aaKnown RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 ATAD3CQ5T2N8 411 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 AADACL4Q5VUY2 407 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 GRINAQ7Z429 371 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 FTMTQ8N4E7 242 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 MAFAQ8NHW3 353 aaPredicted RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 GNRHR2Q96P88 292 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 CDX2Q99626 313 aaPredicted RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 ST6GALNAC5Q9BVH7 336 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 PILRAQ9UKJ1 303 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
RETREG3-208ENST00000589797 CUL9Q8IWT3 2517 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 C4orf47A7E2U8 309 aa13.26□□□□□ -0.29
RETREG3-208ENST00000589797 IGKV1D-16P01601 117 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms