RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 NRMQ8IXM6 262 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 LRRC17Q8N6Y2 441 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 OR10H5Q8NGA6 315 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 OR52J3Q8NH60 311 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 SLC7A13Q8TCU3 470 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 TMEM45BQ96B21 275 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 APH1AQ96BI3 265 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 BPIFA2Q96DR5 249 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 DHRS1Q96LJ7 313 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 RHNO1Q9BSD3 238 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 C19orf24Q9BVV8 132 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 ESRP2Q9H6T0 727 aaKnown RBP13.75□□□□□ -0.21
NCLN-203ENST00000587740 C20orf141Q9NUB4 165 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
NCLN-203ENST00000587740 LOC102725191A0A1B0GVB3 256 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 DHRS12A0PJE2 317 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 ASAH2BP0C7U1 165 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 HOXB6P17509 224 aaKnown RBP13.74□□□□□ -0.21
NCLN-203ENST00000587740 RRM2P31350 389 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 MAGEA2P43356 314 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 PRKCDQ05655 676 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 CASP12Q6UXS9 341 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 AAED1Q7RTV5 226 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 NANOGNBQ7Z5D8 188 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 UEVLDQ8IX04 471 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 CANT1Q8WVQ1 401 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 ZNF385AQ96PM9 386 aaKnown RBP13.74□□□□□ -0.21
NCLN-203ENST00000587740 TNFRSF13CQ96RJ3 184 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 HDHD5Q9BXW7 423 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 GRIP2Q9C0E4 1043 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 BARX1Q9HBU1 254 aaPredicted RBP13.74□□□□□ -0.21
NCLN-203ENST00000587740 KRCC1Q9NPI7 259 aaPredicted RBP13.74□□□□□ -0.21
NCLN-203ENST00000587740 B3GAT1Q9P2W7 334 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 TMEM5Q9Y2B1 443 aa13.74□□□□□ -0.21
NCLN-203ENST00000587740 SHISA9B4DS77 424 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 C11orf98E9PRG8 122 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 BLOC1S5-TXNDC5H3BN57 136 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 RNF13O43567 381 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 CIB2O75838 187 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 KRT36O76013 467 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 SAGP10523 405 aaPredicted RBP13.73□□□□□ -0.21
NCLN-203ENST00000587740 NTF4P34130 210 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 CLDN17P56750 224 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 LSM11P83369 360 aaKnown RBP eCLIP13.73□□□□□ -0.215e-7■■■□□ 17.5
NCLN-203ENST00000587740 POU3F1Q03052 451 aaPredicted RBP13.73□□□□□ -0.21
NCLN-203ENST00000587740 ZP4Q12836 540 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 PXKQ7Z7A4 578 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 EPHX4Q8IUS5 362 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 ADGRG5Q8IZF4 528 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 ZIC4Q8N9L1 334 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 LIPHQ8WWY8 451 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 HSD17B8Q92506 261 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 KCNK17Q96T54 332 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 BEX2Q9BXY8 128 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 TMEM160Q9NX00 188 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 CISD1Q9NZ45 108 aaKnown RBP13.73□□□□□ -0.21
NCLN-203ENST00000587740 PRSS50Q9UI38 385 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 TMCC3Q9ULS5 477 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 NOX1Q9Y5S8 564 aa13.73□□□□□ -0.21
NCLN-203ENST00000587740 TRBV4-1A0A0J9YWV2 114 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 TCRBV3S1A0A5B6 114 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 EFCAB9A8MZ26 197 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 HAX1O00165 279 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 AKAP8O43823 692 aaKnown RBP13.72□□□□□ -0.21
NCLN-203ENST00000587740 HPRP00739 348 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 ADAP00813 363 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 MAKP20794 623 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 IL32P24001 234 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 LOXL1Q08397 574 aaPredicted RBP13.72□□□□□ -0.21
NCLN-203ENST00000587740 FBXW9Q5XUX1 488 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 NIPAL3Q6P499 406 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 Q6ZT83 130 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 ARIH2OSQ8N7S6 290 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 RSRC1Q96IZ7 334 aaKnown RBP13.72□□□□□ -0.21
NCLN-203ENST00000587740 CHID1Q9BWS9 393 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 YY1AP1Q9H869 796 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 NGBQ9NPG2 151 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 TAS2R5Q9NYW4 299 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 UPB1Q9UBR1 384 aa13.72□□□□□ -0.21
NCLN-203ENST00000587740 SH3PXD2BA1X283 911 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 OR6C65A6NJZ3 312 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 TNFRSF11BO00300 401 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 SERPINI2O75830 405 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 IGHV3-9P01782 118 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 HLA-DOBP13765 273 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 EDNRAP25101 427 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 GPR4P46093 362 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 SLC9A3P48764 834 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 SELENOPP49908 381 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 ERFP50548 548 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 SEC23BQ15437 767 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 OR2T5Q6IEZ7 315 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 TMPRSS11FQ6ZWK6 438 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 OAFQ86UD1 273 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 MEX3DQ86XN8 651 aaKnown RBP13.71□□□□□ -0.21
NCLN-203ENST00000587740 ANKK1Q8NFD2 765 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 OR4K5Q8NGD3 323 aa13.71□□□□□ -0.21
NCLN-203ENST00000587740 OR2T29Q8NH02 315 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms