RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CELSR3Q9NYQ7 3312 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 PINLYPA6NC86 204 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 A6NL46 340 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 GJE1A6NN92 205 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 NKX2-8O15522 239 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 LRRTM2O43300 516 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 TRAPPC6AO75865 159 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 P2RY4P51582 365 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 TAS2R43P59537 309 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 HSF2Q03933 536 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 FOXO1Q12778 655 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 SRSF6Q13247 344 aaKnown RBP17.78■□□□□ 0.44
TRIM47-204ENST00000587339 GPR50Q13585 617 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 UEVLDQ8IX04 471 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 SYS1Q8N2H4 156 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 FAM83FQ8NEG4 500 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-204ENST00000587339 OR2M7Q8NG81 312 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 MRPL48Q96GC5 212 aaKnown RBP17.78■□□□□ 0.44
TRIM47-204ENST00000587339 TVP23AA6NH52 213 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 SEC14L5O43304 696 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 GDF1P27539 372 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 CRABP1P29762 137 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 B3GALT5-AS1P59052 145 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 CAMK2BQ13554 666 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 RTP5Q14D33 572 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 CDONQ4KMG0 1287 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 CRTC2Q53ET0 693 aaPredicted RBP17.77■□□□□ 0.44
TRIM47-204ENST00000587339 SYT14Q8NB59 555 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 DTNBP1Q96EV8 351 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 TXNDC15Q96J42 360 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 TMED9Q9BVK6 235 aa17.77■□□□□ 0.44
TRIM47-204ENST00000587339 SLIRPQ9GZT3 109 aaKnown RBP17.77■□□□□ 0.44
TRIM47-204ENST00000587339 TXNL4BQ9NX01 149 aaKnown RBP17.77■□□□□ 0.44
TRIM47-204ENST00000587339 MRPS18CQ9Y3D5 142 aaKnown RBP17.77■□□□□ 0.44
TRIM47-204ENST00000587339 AQP7P3A6NL99 342 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF814B7Z6K7 855 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF670-ZNF695F2Z2N8 137 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 HLA-DQA2P01906 255 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 CTLA4P16410 223 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 CENPAP49450 140 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 BLVRAP53004 296 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF239Q16600 458 aaKnown RBP17.76■□□□□ 0.43
TRIM47-204ENST00000587339 TP53I3Q53FA7 332 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 OR6N2Q8NGY6 317 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 KCNE4Q8WWG9 221 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 KLHL15Q96M94 604 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 KCNK17Q96T54 332 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 TSPAN10Q9H1Z9 355 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-204ENST00000587339 CDV3Q9UKY7 258 aaKnown RBP17.76■□□□□ 0.43
TRIM47-204ENST00000587339 E9PI62 339 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 MAGEB4O15481 346 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-204ENST00000587339 HLA-DPB1P04440 258 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 BIDP55957 195 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 SOX8P57073 446 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 CSNK2A1P68400 391 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-204ENST00000587339 VASNQ6EMK4 673 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 CD200R1LQ6Q8B3 271 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 OXGR1Q96P68 337 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 INTS14Q96SY0 518 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 EMC6Q9BV81 110 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 HES7Q9BYE0 225 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 WDR76Q9H967 626 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 GNG8Q9UK08 70 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 SIRT4Q9Y6E7 314 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-204ENST00000587339 PMF1-BGLAPU3KQ54 211 aa17.76■□□□□ 0.43
TRIM47-204ENST00000587339 IGLV1-36A0A0B4J1U3 117 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 OR5H15A6NDH6 313 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 CDK2AP1O14519 115 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 EIF1BO60739 113 aaKnown RBP17.75■□□□□ 0.43
TRIM47-204ENST00000587339 GPANK1O95872 356 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF43P17038 809 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 H3F3AP84243 136 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 FABP5Q01469 135 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 GLO1Q04760 184 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 WIPI1Q5MNZ9 446 aaPredicted RBP17.75■□□□□ 0.43
TRIM47-204ENST00000587339 C22orf42Q6IC83 251 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 NHLRC1Q6VVB1 395 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 SULF2Q8IWU5 870 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 SFXN2Q96NB2 322 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 B4GALT7Q9UBV7 327 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 FAM186AA6NE01 2351 aa17.75■□□□□ 0.43
TRIM47-204ENST00000587339 LOC102725191A0A1B0GVB3 256 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 PLPP2O43688 288 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 RAMP1O60894 148 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 ETFDHQ16134 617 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 DNM1P34Q6PK57 102 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 RPTNQ6XPR3 784 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 CDC20BQ86Y33 519 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 WDFY1Q8IWB7 410 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 PELI1Q96FA3 418 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 ADAD1Q96M93 576 aaKnown RBP17.74■□□□□ 0.43
TRIM47-204ENST00000587339 MNTQ99583 582 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 COQ7Q99807 217 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 OR2B2Q9GZK3 357 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 MARCH7Q9H992 704 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 LAMP5Q9UJQ1 280 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 GSTK1Q9Y2Q3 226 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 ALPK2Q86TB3 2170 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 MED12Q93074 2177 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 A0A0J9YW62 118 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms