RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 STUB1Q9UNE7 303 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 MOKQ9UQ07 419 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 RPH3AQ9Y2J0 694 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-204ENST00000586417 LRRC3CA6NJW4 275 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 FAM171A2A8MVW0 826 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 AKAP8O43823 692 aaKnown RBP18.31■□□□□ 0.52
ATG4D-204ENST00000586417 SELENOFO60613 162 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 AKR7A3O95154 331 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 RENP00797 406 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 OR2T7P0C7T2 308 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 PSMA1P25786 263 aaKnown RBP18.31■□□□□ 0.52
ATG4D-204ENST00000586417 FKBP2P26885 142 aaKnown RBP18.31■□□□□ 0.52
ATG4D-204ENST00000586417 HCCSP53701 268 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 ARG2P78540 354 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 EEF1A1P5Q5VTE0 462 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 USP43Q70EL4 1123 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 ZFP41Q8N8Y5 198 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 MDS2Q8NDY4 140 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 OR2T27Q8NH04 317 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 RNF32Q9H0A6 362 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 SYT4Q9H2B2 425 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 B3GALT5Q9Y2C3 310 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 NOX1Q9Y5S8 564 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 PMF1-BGLAPU3KQ54 211 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 USP24Q9UPU5 2620 aa18.31■□□□□ 0.52
ATG4D-204ENST00000586417 SPENQ96T58 3664 aaKnown RBP18.3■□□□□ 0.52
ATG4D-204ENST00000586417 MED12Q93074 2177 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 A0A1W2PNR3 127 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 A0A1W2PNV4 684 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 OR2M5A3KFT3 312 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 PRSS37A4D1T9 235 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 NPIPB13A6NJU9 1138 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 NPIPB4C9JG80 1138 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 CDK2AP1O14519 115 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 LRRTM2O43300 516 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 P2RY4P51582 365 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 GPR85P60893 370 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 BDH1Q02338 343 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 GDPGP1Q6ZNW5 385 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 KLBQ86Z14 1044 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 SLC35F2Q8IXU6 374 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 PM20D2Q8IYS1 436 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 ADPRHL1Q8NDY3 354 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 OR2T4Q8NH00 348 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 SLC39A7Q92504 469 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 OR5B2Q96R09 309 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 SRA1Q9HD15 236 aaKnown RBP18.3■□□□□ 0.52
ATG4D-204ENST00000586417 BABAM2Q9NXR7 383 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 VSX1Q9NZR4 365 aaPredicted RBP18.3■□□□□ 0.52
ATG4D-204ENST00000586417 DKKL1Q9UK85 242 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 HDGFL3Q9Y3E1 203 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 PCDHGA9Q9Y5G4 932 aaKnown RBP18.3■□□□□ 0.52
ATG4D-204ENST00000586417 PNMA8CA0A1B0GUJ8 204 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 A0A1W2PRG6 482 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 XKRYO14609 159 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 CLPXO76031 633 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 ZNF17P17021 662 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 SFTPDP35247 375 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 RPS25P62851 125 aaKnown RBP18.3■□□□□ 0.52
ATG4D-204ENST00000586417 RUNX1T1Q06455 604 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 MELKQ14680 651 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 TMEM176BQ3YBM2 270 aaPredicted RBP18.3■□□□□ 0.52
ATG4D-204ENST00000586417 VASNQ6EMK4 673 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 NHLRC1Q6VVB1 395 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 ZBTB46Q86UZ6 589 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 C5orf34Q96MH7 638 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 NUAK2Q9H093 628 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.3■□□□□ 0.52
ATG4D-204ENST00000586417 B3GAT1Q9P2W7 334 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 COPS3Q9UNS2 423 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 PCDHGB7Q9Y5F8 929 aa18.3■□□□□ 0.52
ATG4D-204ENST00000586417 BSNQ9UPA5 3926 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 SRD5A2P31213 254 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 TNFSF10P50591 281 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 TUBA1BP68363 451 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 ROR2Q01974 943 aaKnown RBP18.29■□□□□ 0.52
ATG4D-204ENST00000586417 RAET1LQ5VY80 246 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 TUBA1AQ71U36 451 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 PXKQ7Z7A4 578 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 WDFY1Q8IWB7 410 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 ZNF511Q8NB15 262 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 KBTBD8Q8NFY9 601 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 ASB10Q8WXI3 467 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 ABHD17AQ96GS6 310 aa18.29■□□□□ 0.52
ATG4D-204ENST00000586417 SLIRPQ9GZT3 109 aaKnown RBP18.29■□□□□ 0.52
ATG4D-204ENST00000586417 PINLYPA6NC86 204 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 MT-ND5P03915 603 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 GABRA5P31644 462 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 B3GALT5-AS1P59052 145 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 HSF1Q00613 529 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 ZNF239Q16600 458 aaKnown RBP18.28■□□□□ 0.52
ATG4D-204ENST00000586417 DGUOKQ16854 277 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 CD200R1LQ6Q8B3 271 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 TIGD4Q8IY51 512 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 TMEM203Q969S6 136 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 MIB2Q96AX9 1013 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 C4orf36Q96KX1 117 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 DACH2Q96NX9 599 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 TRAPPC4Q9Y296 219 aa18.28■□□□□ 0.52
ATG4D-204ENST00000586417 FKBP7Q9Y680 259 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms