RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 OR11A1Q9GZK7 315 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 OR51E2Q9H255 320 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 DCSTAMPQ9H295 470 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 MMP27Q9H306 513 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 PROK2Q9HC23 129 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 TRIM36Q9NQ86 728 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 FBXL2Q9UKC9 423 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 RPH3AQ9Y2J0 694 aaPredicted RBP9.34□□□□□ -0.91
LIG3-203ENST00000585370 KCNMB2Q9Y691 235 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 TMEM14AQ9Y6G1 99 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 LOC100506127A0A0U1RQW1 187 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 TRDV1A0A1B0GX56 115 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 A0A1W2PNV4 684 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 PRSS37A4D1T9 235 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 CLEC18AA5D8T8 446 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 VGLL3A8MV65 326 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 C11orf98E9PRG8 122 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 MS4A18H0YCH9 400 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 PHYHO14832 338 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 ARHGEF9O43307 516 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 EFNA2O43921 213 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 EIF1BO60739 113 aaKnown RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 APOL3O95236 402 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 PMS2P2O95744 297 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 CD1AP06126 327 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 TACSTD2P09758 323 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 NR4A1P22736 598 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 SRD5A2P31213 254 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 FGF9P31371 208 aaPredicted RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 GABRA5P31644 462 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 SOX6P35712 828 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 ACVR1BP36896 505 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 CRYBB2P43320 205 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 SOX8P57073 446 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 NCS1P62166 190 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 LSM3P62310 102 aaKnown RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 ATP1A4Q13733 1029 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 OR7A5Q15622 319 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 ACKR1Q16570 336 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 MS4A18Q3C1V0 323 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 GXYLT1Q4G148 440 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 PRAMEF20Q5VT98 475 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 EEF1A1P5Q5VTE0 462 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 LIPKQ5VXJ0 399 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 DNM1P34Q6PK57 102 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 CLEC18BQ6UXF7 455 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 SHFQ7M4L6 423 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 SLC16A9Q7RTY1 509 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 ZBTB46Q86UZ6 589 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 SLC35F2Q8IXU6 374 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 TMEM99Q8N816 258 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 CLEC1AQ8NC01 280 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 CLEC18CQ8NCF0 446 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 ZNF519Q8TB69 540 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 FNDC8Q8TC99 324 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 SPRYD4Q8WW59 207 aaPredicted RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 S100ZQ8WXG8 99 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 THAP4Q8WY91 577 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 ZMYND19Q96E35 227 aaPredicted RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 ARL5BQ96KC2 179 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 CHCHD6Q9BRQ6 235 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 UTP23Q9BRU9 249 aaKnown RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 MARCH7Q9H992 704 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 RPRD1BQ9NQG5 326 aaKnown RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 VSX1Q9NZR4 365 aaPredicted RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 CCDC59Q9P031 241 aaKnown RBP9.33□□□□□ -0.92
LIG3-203ENST00000585370 DKKL1Q9UK85 242 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 TP53TG5Q9Y2B4 290 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 NOTCH2Q04721 2471 aa9.33□□□□□ -0.92
LIG3-203ENST00000585370 HSPB2A8KAH6 182 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 B4DXG7 233 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 NPIPA5E9PKD4 350 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 ZNF670-ZNF695F2Z2N8 137 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 DNPH1O43598 174 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 ZIC3O60481 467 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 GPX5O75715 221 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 VAMP5O95183 116 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 CLUP10909 449 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 IMPDH2P12268 514 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 GBX2P52951 348 aaPredicted RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 RAC1P63000 192 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 CSNK2A1P68400 391 aaPredicted RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 MYBPHQ13203 477 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 HSPB2Q16082 182 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 TMEM176BQ3YBM2 270 aaPredicted RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 CCDC58Q4VC31 144 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 MESTQ5EB52 335 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 LINC01590Q5TEZ4 76 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 CD200R1LQ6Q8B3 271 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 PLEKHG7Q6ZR37 379 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 TMPPEQ6ZT21 453 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 CROCCP3Q8IVE0 287 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 BEST3Q8N1M1 668 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 MS4A15Q8N5U1 240 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 ATP6V1C2Q8NEY4 427 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 OR6K6Q8NGW6 343 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 NDNFQ8TB73 568 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 TBC1D15Q8TC07 691 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 SNX33Q8WV41 574 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 TM9SF4Q92544 642 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms