RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 FTCDNL1E5RQL4 147 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 HMGN4O00479 90 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 AIM2O14862 343 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 MGRN1O60291 552 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 VAMP5O95183 116 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 G6PDP11413 515 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 CXCR1P25024 350 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 MAPK1P28482 360 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 ACAA2P42765 397 aaKnown RBP15.41■□□□□ 0.06
TOP3A-220ENST00000585031 CAPZA2P47755 286 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 MAP2K6P52564 334 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 PIGFQ07326 219 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 GPAT3Q53EU6 434 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 MRPL2Q5T653 305 aaKnown RBP15.41■□□□□ 0.06
TOP3A-220ENST00000585031 ATAD3BQ5T9A4 648 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 PRAMEF8Q5VWM4 474 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 PRAMEF7Q5VXH5 474 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 SAXO2Q658L1 398 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 DOK3Q7L591 496 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 ANKRD46Q86W74 232 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 ANKK1Q8NFD2 765 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 OR4A15Q8NGL6 344 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 TSPAN32Q96QS1 320 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 PRPF18Q99633 342 aaKnown RBP15.41■□□□□ 0.06
TOP3A-220ENST00000585031 THTPAQ9BU02 230 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 ZNF416Q9BWM5 594 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 RASD1Q9Y272 281 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 GPR45Q9Y5Y3 372 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 CACNG2Q9Y698 323 aa15.41■□□□□ 0.06
TOP3A-220ENST00000585031 CLPTM1O96005 669 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 RPS4Y1P22090 263 aaKnown RBP15.4■□□□□ 0.06
TOP3A-220ENST00000585031 CCL8P80075 99 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 FBLN7Q53RD9 439 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 C1orf140Q5VVS0 124 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 DEFB107AQ8IZN7 70 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 ZBTB18Q99592 522 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 PTDSS2Q9BVG9 487 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 ASIC5Q9NY37 505 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 ZNF69Q9UC07 566 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 DUSP13Q9UII6 198 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 NDUFAF1Q9Y375 327 aa15.4■□□□□ 0.06
TOP3A-220ENST00000585031 A8MVM7 634 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 MRASO14807 208 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 ANGPT2O15123 496 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 SLC22A3O75751 556 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 PNMTP11086 282 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 PRG2P13727 222 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 MDKP21741 143 aaPredicted RBP15.39■□□□□ 0.05
TOP3A-220ENST00000585031 GCH1P30793 250 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 HNRNPA0Q13151 305 aaKnown RBP15.39■□□□□ 0.05
TOP3A-220ENST00000585031 TRMT5Q32P41 509 aaKnown RBP15.39■□□□□ 0.05
TOP3A-220ENST00000585031 COQ5Q5HYK3 327 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 KLF17Q5JT82 389 aaPredicted RBP15.39■□□□□ 0.05
TOP3A-220ENST00000585031 HACD2Q6Y1H2 254 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 CMIPQ8IY22 773 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 PGAM4Q8N0Y7 254 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 TMEM123Q8N131 208 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 GTF3AQ92664 365 aaKnown RBP15.39■□□□□ 0.05
TOP3A-220ENST00000585031 TAPBPLQ9BX59 468 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 PDP1Q9P0J1 537 aaPredicted RBP15.39■□□□□ 0.05
TOP3A-220ENST00000585031 WIPI2Q9Y4P8 454 aa15.39■□□□□ 0.05
TOP3A-220ENST00000585031 SOX21Q9Y651 276 aaPredicted RBP15.39■□□□□ 0.05
TOP3A-220ENST00000585031 ZNF99A8MXY4 864 aaPredicted RBP15.38■□□□□ 0.05
TOP3A-220ENST00000585031 RNASET2O00584 256 aaKnown RBP15.38■□□□□ 0.05
TOP3A-220ENST00000585031 CPSF4O95639 269 aaKnown RBP15.38■□□□□ 0.05
TOP3A-220ENST00000585031 TFPTP0C1Z6 253 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 CD79AP11912 226 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 UQCRC2P22695 453 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 CLDN8P56748 225 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 EGR4Q05215 589 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 MAPK11Q15759 364 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 REP15Q6BDI9 236 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 LEG1Q6P5S2 330 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 NET1Q7Z628 596 aaPredicted RBP15.38■□□□□ 0.05
TOP3A-220ENST00000585031 BHLHE22Q8NFJ8 381 aaPredicted RBP15.38■□□□□ 0.05
TOP3A-220ENST00000585031 NEURL3Q96EH8 262 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 OR2M2Q96R28 347 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 PKP2Q99959 881 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 ZMAT3Q9HA38 289 aaKnown RBP15.38■□□□□ 0.05
TOP3A-220ENST00000585031 GID8Q9NWU2 228 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 RCE1Q9Y256 329 aa15.38■□□□□ 0.05
TOP3A-220ENST00000585031 SLC43A1O75387 559 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 ALX3O95076 343 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 ATP6V1G2O95670 118 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 AGR2O95994 175 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 RBMXP38159 391 aaKnown RBP15.37■□□□□ 0.05
TOP3A-220ENST00000585031 NME5P56597 212 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 LCN2P80188 198 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 SNCBQ16143 134 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 GSG1Q2KHT4 349 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 RBMS3Q6XE24 437 aaKnown RBP15.37■□□□□ 0.05
TOP3A-220ENST00000585031 ZNF584Q8IVC4 421 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 GPR137CQ8N3F9 429 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 CADM2Q8N3J6 435 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 OR9I1Q8NGQ6 314 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 FGFBP3Q8TAT2 258 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 SLC25A36Q96CQ1 311 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 TAAR3PQ9P1P4 343 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 CHST2Q9Y4C5 530 aa15.37■□□□□ 0.05
TOP3A-220ENST00000585031 C17orf100A8MU93 164 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms