RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TROVE2P10155 538 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC47-206ENST00000584112 AHCYP23526 432 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 PPOXP50336 477 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 PDLIM4P50479 330 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 IDH3GP51553 393 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-206ENST00000584112 NPRL3Q12980 569 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 EFNB3Q15768 340 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 MST1LQ2TV78 715 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 CR1LQ2VPA4 569 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 CARD17Q5XLA6 110 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 TTC33Q6PID6 262 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF627Q7L945 461 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 C20orf196Q8IYI0 205 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 GPR32P1Q8NGA4 272 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 OR6T1Q8NGN1 323 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 OR6N1Q8NGY5 312 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 OR10A6Q8NH74 314 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 ADAMTS16Q8TE57 1224 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-206ENST00000584112 MPP4Q96JB8 637 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 MOGAT1Q96PD6 335 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 VRK1Q99986 396 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-206ENST00000584112 WFDC6Q9BQY6 131 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 EMC6Q9BV81 110 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 SLC19A3Q9BZV2 496 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 MED29Q9NX70 200 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 POFUT2Q9Y2G5 429 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 DYNC2H1Q8NCM8 4307 aaKnown RBP9.62□□□□□ -0.87
CCDC47-206ENST00000584112 IGHV2OR16-5A0A0B4J2B6 119 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 BBIP1A8MTZ0 92 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 NPPAP01160 153 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 ERCC1P07992 297 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-206ENST00000584112 HLA-DOBP13765 273 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 NPR2P20594 1047 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 CD247P20963 164 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 CALCRP30988 508 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 CSNK1A1P48729 337 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 CAMK2DQ13557 499 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 MAPRE2Q15555 327 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 NPTX1Q15818 432 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 ADIPOQQ15848 244 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 GSG1Q2KHT4 349 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 VMACQ2NL98 169 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 MMEL1Q495T6 779 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 COQ5Q5HYK3 327 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 NANOGP8Q6NSW7 305 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 VHLLQ6RSH7 139 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF813Q6ZN06 617 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 CCDC80Q76M96 950 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 MDP1Q86V88 176 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 VANGL1Q8TAA9 524 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-206ENST00000584112 TAMM41Q96BW9 452 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 SORCS2Q96PQ0 1159 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 ECSITQ9BQ95 431 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 PIMREGQ9BSJ6 248 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 TMEM120AQ9BXJ8 343 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 ULBP2Q9BZM5 246 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 RAB1BQ9H0U4 201 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 PCDHAC1Q9H158 963 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 PLK3Q9H4B4 646 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 DENND2DQ9H6A0 471 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-206ENST00000584112 NANOGQ9H9S0 305 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 NANSQ9NR45 359 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 FBXL3Q9UKT7 428 aa9.62□□□□□ -0.87
CCDC47-206ENST00000584112 HERC2O95714 4834 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 LOC390937A0A1W2PQ73 354 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 LRRN3E7EW58 273 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 C11orf98E9PRG8 122 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 hCG_2039718K7EN88 272 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 SERPINI2O75830 405 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 SEC14L2O76054 403 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 HIST1H2ABP04908 130 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 CELA3BP08861 270 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 CD79AP11912 226 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 USF1P22415 310 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-206ENST00000584112 SRP14P37108 136 aaKnown RBP9.61□□□□□ -0.87
CCDC47-206ENST00000584112 BIDP55957 195 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 HGFACQ04756 655 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 ZP4Q12836 540 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 DAG1Q14118 895 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF74Q16587 644 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 VAX1Q5SQQ9 334 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 PHYHD1Q5SRE7 291 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 ERICH5Q6P6B1 374 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 NHLRC1Q6VVB1 395 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 HIST3H2AQ7L7L0 130 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 MYPOPQ86VE0 399 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF540Q8NDQ6 660 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 OR8J3Q8NGG0 315 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 OR6X1Q8NH79 312 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 FAM216AQ8WUB2 273 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 HIST1H2ACQ93077 130 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 MSI2Q96DH6 328 aaKnown RBP9.61□□□□□ -0.87
CCDC47-206ENST00000584112 TXNDC15Q96J42 360 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 FOXB1Q99853 325 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF426Q9BUY5 554 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 POLR2J2Q9GZM3 115 aaKnown RBP9.61□□□□□ -0.87
CCDC47-206ENST00000584112 POLR2J3Q9H1A7 115 aaKnown RBP9.61□□□□□ -0.87
CCDC47-206ENST00000584112 SEC61A2Q9H9S3 476 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 B3GNT2Q9NY97 397 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms