RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ZNF208O43345 1280 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 FZD7O75084 574 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 PDE5AO76074 875 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 CPSF4O95639 269 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 HPRP00739 348 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 KRT16P08779 473 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 ADRA2AP08913 450 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 TCN1P20061 433 aaPredicted RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 PRPS1L1P21108 318 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 COMPP49747 757 aaPredicted RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 POLR2HP52434 150 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 NME5P56597 212 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 LMO4P61968 165 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 SLC35A1P78382 337 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 ARF1P84077 181 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 ROR2Q01974 943 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 EMX2Q04743 252 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 SQLEQ14534 574 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 GFOD2Q3B7J2 385 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 LSM12Q3MHD2 195 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 KRT80Q6KB66 452 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 NIPAL3Q6P499 406 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 DOK3Q7L591 496 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 SSX8Q7RTT4 187 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 GPAT4Q86UL3 456 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 TMEM123Q8N131 208 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 C10orf111Q8N326 155 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 PAQR4Q8N4S7 273 aaPredicted RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 ZBTB34Q8NCN2 500 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 NUP37Q8NFH4 326 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 OR8J2Q8NGG1 315 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 KIF18AQ8NI77 898 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 TCP10LQ8TDR4 215 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 ST8SIA2Q92186 375 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 VPS33AQ96AX1 596 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 MOAP1Q96BY2 351 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 ZBTB9Q96C00 473 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 TUBGCP3Q96CW5 907 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 C1orf147Q96MC9 270 aaPredicted RBP6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 TSPAN32Q96QS1 320 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 WFDC6Q9BQY6 131 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 SLC35A5Q9BS91 424 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 MRI1Q9BV20 369 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 ZNF442Q9H7R0 627 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 G6PC2Q9NQR9 355 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 ADPRHL2Q9NX46 363 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 B3GNT2Q9NY97 397 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 FZR1Q9UM11 496 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 SLC35A3Q9Y2D2 325 aa6.73□□□□□ -1.33
PPP4R1-225ENST00000583438 TMEM89A2RUT3 159 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 CDHR4A6H8M9 788 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 B5MCH6 92 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 FAAHO00519 579 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 TRAF3IP2O43734 574 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 AK1P00568 194 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 HLA-HP01893 362 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 BPGMP07738 259 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 PATE4P0C8F1 98 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 PNMTP11086 282 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 HLA-DOBP13765 273 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 ZNF14P17017 642 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 ADRA2CP18825 462 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 UQCRC2P22695 453 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 SLC1A3P43003 542 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 ALDH3B1P43353 468 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 CCT5P48643 541 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 CLK1P49759 484 aaKnown RBP6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 CHN2P52757 468 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 ARFIP2P53365 341 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 DVL1P1P54792 670 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 NAA20P61599 178 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 UFM1P61960 85 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 SNTB2Q13425 540 aaKnown RBP6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 RAB39AQ14964 217 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 CHI3L2Q15782 390 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 GPAT3Q53EU6 434 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 SPRNQ5BIV9 151 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 C12orf54Q6X4T0 127 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 SPATA21Q7Z572 469 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 SERPINA11Q86U17 422 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 ZNF584Q8IVC4 421 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 ZDHHC22Q8N966 263 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 POMGNT2Q8NAT1 580 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 CKAP2Q8WWK9 683 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 ZHX1-C8orf76Q96EF9 292 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 KTI12Q96EK9 354 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 IQCGQ9H095 443 aaKnown RBP6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 GPR35Q9HC97 309 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 ATAD3AQ9NVI7 634 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 TREM2Q9NZC2 230 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 MARCOQ9UEW3 520 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 PCDHGB4Q9UN71 923 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 CACNG2Q9Y698 323 aa6.72□□□□□ -1.33
PPP4R1-225ENST00000583438 CFAP73A6NFT4 308 aa6.71□□□□□ -1.34
PPP4R1-225ENST00000583438 OR6C65A6NJZ3 312 aa6.71□□□□□ -1.34
PPP4R1-225ENST00000583438 DUXAA6NLW8 204 aa6.71□□□□□ -1.34
PPP4R1-225ENST00000583438 LRRN3E7EW58 273 aa6.71□□□□□ -1.34
PPP4R1-225ENST00000583438 RPL36A-HNRNPH2H7BZ11 118 aa6.71□□□□□ -1.34
PPP4R1-225ENST00000583438 SLC16A6O15403 523 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms