RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 NCR1O76036 304 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 AHSA1O95433 338 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 NPPAP01160 153 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 HLA-HP01893 362 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 C1QCP02747 245 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 DBIP07108 87 aaKnown RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 NAT2P11245 290 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 GTF2E2P29084 291 aaKnown RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 PRDX6P30041 224 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 MVDP53602 400 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 RPS23P62266 143 aaKnown RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 GALK2Q01415 458 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 PIGFQ07326 219 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 ZP4Q12836 540 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 GLIPR1L2Q4G1C9 344 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 AVPI1Q5T686 147 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 DCAF12L2Q5VW00 463 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 WBP2NLQ6ICG8 309 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 RBMS3Q6XE24 437 aaKnown RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 MSRB3Q8IXL7 192 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 POU5F2Q8N7G0 328 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 MFSD8Q8NHS3 518 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 RNF217Q8TC41 542 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 PNPT1Q8TCS8 783 aaKnown RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 RAB39BQ96DA2 213 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 CMTM5Q96DZ9 223 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 OXGR1Q96P68 337 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 UNKLQ9H9P5 680 aaKnown RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 RLIMQ9NVW2 624 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 B3GNT2Q9NY97 397 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 VAPAQ9P0L0 249 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 MYEF2Q9P2K5 600 aaKnown RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 PRDM4Q9UKN5 801 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF346Q9UL40 294 aaKnown RBP10.53□□□□□ -0.72
TOP3A-215ENST00000583328 CORO2BQ9UQ03 480 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 TRRAPQ9Y4A5 3859 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF99A8MXY4 864 aaPredicted RBP10.52□□□□□ -0.73
TOP3A-215ENST00000583328 EVPLLA8MZ36 301 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 M0R3G1 203 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 RP2O75695 350 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 PRSS23O95084 383 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 NR2F1P10589 423 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 PNMTP11086 282 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF35P13682 527 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 RPS4Y1P22090 263 aaKnown RBP10.52□□□□□ -0.73
TOP3A-215ENST00000583328 ACAA2P42765 397 aaKnown RBP10.52□□□□□ -0.73
TOP3A-215ENST00000583328 FADDQ13158 208 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 GSG1Q2KHT4 349 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 ALKBH6Q3KRA9 238 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 RUNDC3AQ59EK9 446 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 COX20Q5RI15 118 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 PEX5LQ8IYB4 626 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 PIK3C3Q8NEB9 887 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 STK35Q8TDR2 534 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 RCN3Q96D15 328 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 CGREF1Q99674 301 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 C7orf69Q9H7B7 122 aa10.52□□□□□ -0.73
TOP3A-215ENST00000583328 THUMPD1Q9NXG2 353 aaKnown RBP10.52□□□□□ -0.73
TOP3A-215ENST00000583328 FXYD1O00168 92 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 AKAP8O43823 692 aaKnown RBP10.51□□□□□ -0.73
TOP3A-215ENST00000583328 NPIPB7O75200 414 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 BMP2P12643 396 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF14P17017 642 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-215ENST00000583328 GPX2P18283 190 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 CRATP43155 626 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 RAD52P43351 418 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 MAGEB1P43366 347 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 RPS5P46782 204 aaKnown RBP10.51□□□□□ -0.73
TOP3A-215ENST00000583328 PTDSS1P48651 473 aaKnown RBP10.51□□□□□ -0.73
TOP3A-215ENST00000583328 SELENOVP59797 346 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 DSTNP60981 165 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 RGNQ15493 299 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 FXNQ16595 210 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 NKPD1Q17RQ9 610 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 LIN52Q52LA3 116 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 CARD17Q5XLA6 110 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 VRK2Q86Y07 508 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 SIGLECL1Q8N7X8 197 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 LRRC58Q96CX6 371 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 DUX5Q96PT3 197 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 CPPED1Q9BRF8 314 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-215ENST00000583328 C1QTNF5Q9BXJ0 243 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 EFCAB1Q9HAE3 211 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 GID8Q9NWU2 228 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 TAAR3PQ9P1P4 343 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 GPR160Q9UJ42 338 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 POFUT2Q9Y2G5 429 aa10.51□□□□□ -0.73
TOP3A-215ENST00000583328 CDHR4A6H8M9 788 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 DEAF1O75398 565 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-215ENST00000583328 RAB36O95755 333 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 ETFAP13804 333 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 GATA3P23771 443 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 PRTN3P24158 256 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 ZFP36P26651 326 aaKnown RBP10.5□□□□□ -0.73
TOP3A-215ENST00000583328 CCL8P80075 99 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 TEKQ02763 1124 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 PHYHD1Q5SRE7 291 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 TMEM154Q6P9G4 183 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 HACD2Q6Y1H2 254 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms