RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PYROXD1Q8WU10 500 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 TPPP3Q9BW30 176 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 C12orf10Q9HB07 376 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 MCCC2Q9HCC0 563 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 PALMDQ9NP74 551 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 ADAP2Q9NPF8 381 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 EXD2Q9NVH0 621 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 ZNRD1Q9P1U0 126 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 TMEM14AQ9Y6G1 99 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 RPAP1Q9BWH6 1393 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 YEATS2Q9ULM3 1422 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 IGLV3-12A0A075B6K2 115 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 IGHV5-10-1A0A0J9YXX1 117 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 MBLAC1A4D2B0 266 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 K7EM74 188 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 RAD51BO15315 384 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 WDR62O43379 1518 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 PRKAB2O43741 272 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 UPK3AO75631 287 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 GABARAPO95166 117 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 POLR2MP0CAP2 368 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 IGHV1-8P0DP01 117 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 FOLR1P15328 257 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 RPA2P15927 270 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 TCN1P20061 433 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 SLC2A5P22732 501 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 CCR8P51685 355 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 MSH6P52701 1360 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 CRYBB1P53674 252 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 NCBP1Q09161 790 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 HSP90AA5PQ58FG0 334 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 BRD3OSQ6XYD6 125 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 ZNF493Q6ZR52 646 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 NUDCD3Q8IVD9 361 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 COL27A1Q8IZC6 1860 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 LGI3Q8N145 548 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 OSR2Q8N2R0 312 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 LINC00304Q8N9R0 145 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 NEURL3Q96EH8 262 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 MED8Q96G25 268 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 TUBGCP6Q96RT7 1819 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 OSBPL10Q9BXB5 764 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 LINC00597Q9H2U6 94 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 YY1AP1Q9H869 796 aa1.53□□□□□ -2.16
SMCHD1-206ENST00000581631 GPATCH8Q9UKJ3 1502 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 A0A1B0GWJ7 208 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 SGK1O00141 431 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 IDH1O75874 414 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 SLC25A14O95258 325 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 FABP3P05413 133 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 CDK16Q00536 496 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 GINS1Q14691 196 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 PON3Q15166 354 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 POU2AF1Q16633 256 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 KLHL38Q2WGJ6 581 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 NADK2Q4G0N4 442 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 TRIM40Q6P9F5 258 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 NTM-AS1Q6ZSK4 140 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF547Q8IVP9 402 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 MFSD9Q8NBP5 474 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 L3HYPDHQ96EM0 354 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 SENP8Q96LD8 212 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 MS4A4EQ96PG1 132 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 SLC38A2Q96QD8 506 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 SMOXQ9NWM0 555 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 KIAA1257Q9ULG3 409 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 PIKFYVEQ9Y2I7 2098 aa1.52□□□□□ -2.17
SMCHD1-206ENST00000581631 CABIN1Q9Y6J0 2220 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 KIF16BQ96L93 1317 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 CENPJQ9HC77 1338 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 IGHV3-74A0A0B4J1X5 117 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 TMEM223A0PJW6 202 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 ARPC3O15145 178 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 MGRN1O60291 552 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 TBX19O60806 448 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 CCNKO75909 580 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 IGKV1D-16P01601 117 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 CAPN1P07384 714 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 OPRD1P41143 372 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 NAMPTP43490 491 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 CX3CR1P49238 355 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 DUSP3P51452 185 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 FILIP1LQ4L180 1135 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 SFT2D3Q587I9 215 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 DUX4L9Q6RFH8 374 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 PUSL1Q8N0Z8 303 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF557Q8N988 423 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 MAGEE2Q8TD90 523 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 RNF139Q8WU17 664 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 TM4SF18Q96CE8 201 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 TTC25Q96NG3 672 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 HMG20AQ9NP66 347 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 GPATCH2LQ9NWQ4 482 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 PSG8Q9UQ74 426 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 DOCK9Q9BZ29 2069 aa1.51□□□□□ -2.17
SMCHD1-206ENST00000581631 PNPLA6Q8IY17 1366 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF726A6NNF4 738 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 HIDE1A8MVS5 230 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms