RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 C10orf82Q8WW14 230 aa18.41■□□□□ 0.54
CSNK1D-216ENST00000581108 HIST1H2ACQ93077 130 aa18.41■□□□□ 0.54
CSNK1D-216ENST00000581108 FOXN4Q96NZ1 517 aa18.41■□□□□ 0.54
CSNK1D-216ENST00000581108 DOK1Q99704 481 aa18.41■□□□□ 0.54
CSNK1D-216ENST00000581108 MRGBPQ9NV56 204 aa18.41■□□□□ 0.54
CSNK1D-216ENST00000581108 ZNF446Q9NWS9 450 aa18.41■□□□□ 0.54
CSNK1D-216ENST00000581108 GLTPQ9NZD2 209 aa18.41■□□□□ 0.54
CSNK1D-216ENST00000581108 ZNF229Q9UJW7 825 aa18.41■□□□□ 0.54
CSNK1D-216ENST00000581108 SH3PXD2BA1X283 911 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 BBIP1A8MTZ0 92 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 ASAH2BP0C7U1 165 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 UMPSP11172 480 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 ZNF14P17017 642 aaPredicted RBP18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 NR4A1P22736 598 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 PPOXP50336 477 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 RAB1AP62820 205 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 SNTB2Q13425 540 aaKnown RBP18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 MELKQ14680 651 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 LRFN4Q6PJG9 635 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 ZCCHC24Q8N2G6 241 aaKnown RBP18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 BAG5Q9UL15 447 aa18.4■□□□□ 0.54
CSNK1D-216ENST00000581108 BLOC1S5-TXNDC5H3BN57 136 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 PATE4P0C8F1 98 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 IGHV4-31P0DP07 118 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 NR4A2P43354 598 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 OR1E2P47887 323 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 GIPRP48546 466 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 PTDSS1P48651 473 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 TAS2R41P59536 307 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 LSM11P83369 360 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 GUCY1A3Q02108 690 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 PIN1Q13526 163 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 GGTLC2Q14390 218 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 MAPRE2Q15555 327 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 ERICH5Q6P6B1 374 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 DEF8Q6ZN54 512 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 PIWIL3Q7Z3Z3 882 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 SKA3Q8IX90 412 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 PFN4Q8NHR9 129 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 FGFBP3Q8TAT2 258 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 TMEM255BQ8WV15 326 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 ZNF566Q969W8 418 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 SLC25A44Q96H78 314 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 PIMREGQ9BSJ6 248 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 RAB1BQ9H0U4 201 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 RIMS3Q9UJD0 308 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 CUBNO60494 3623 aa18.39■□□□□ 0.53
CSNK1D-216ENST00000581108 LOC390937A0A1W2PQ73 354 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 NDUFS8O00217 210 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 MT-ND1P03886 318 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 ZNF35P13682 527 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 UGT2B15P54855 530 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 CYB5R2Q6BCY4 276 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 NANOGNBQ7Z5D8 188 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 PCYOX1LQ8NBM8 494 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 KCNK17Q96T54 332 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 GID8Q9NWU2 228 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 MXRA5Q9NR99 2828 aa18.38■□□□□ 0.53
CSNK1D-216ENST00000581108 BCL10O95999 233 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 IFNA14P01570 189 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 F13BP05160 661 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 IGFBP1P08833 259 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 PGA4P0DJD7 388 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 PGA3P0DJD8 388 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 FUT1P19526 365 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 KDELR2P33947 212 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 RAB39AQ14964 217 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 MSMPQ1L6U9 139 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 CDK20Q8IZL9 346 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 SLC22A24Q8N4F4 322 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 DENND2DQ9H6A0 471 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 MYOZ1Q9NP98 299 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 C20orf141Q9NUB4 165 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 ARMCX1Q9P291 453 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 FBXO9Q9UK97 447 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 CMAHPQ9Y471 501 aa18.37■□□□□ 0.53
CSNK1D-216ENST00000581108 DHHO43323 396 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 OR7A10O76100 309 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 UBL3O95164 117 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 OR5F1O95221 314 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 RAB36O95755 333 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 QDPRP09417 244 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 RBM34P42696 430 aaKnown RBP18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 RUNX1T1Q06455 604 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 RPL18Q07020 188 aaKnown RBP18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 CHRFAM7AQ494W8 412 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 LRRC23Q53EV4 343 aaPredicted RBP18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 CYBRD1Q53TN4 286 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 TMEM239Q8WW34 195 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 TPD52L3Q96J77 140 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 SH3GL3Q99963 347 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 DYNLRB1Q9NP97 96 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 TMEM38BQ9NVV0 291 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 CAPN7Q9Y6W3 813 aa18.36■□□□□ 0.53
CSNK1D-216ENST00000581108 IGHV4-61A0A0C4DH41 118 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 FAM220BPB1ANY3 271 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 ADRA2AP08913 450 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 OR8G3PP0DMU2 310 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 DAOP14920 347 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 ZNF16P17020 682 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms