RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ZNF350Q9GZX5 532 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 TNFRSF12AQ9NP84 129 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 SLC35A3Q9Y2D2 325 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 USH1CQ9Y6N9 552 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 PLSCR5A0PG75 271 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 ADARB2-AS1A8MUL3 147 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 VAMP5O95183 116 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 LAMP1P11279 417 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 CBLP22681 906 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 UQCRC2P22695 453 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 CFHR2P36980 270 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 MDH2P40926 338 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 ETV4P43268 484 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 UCP2P55851 309 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 KIAA0040Q15053 153 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 NKAPLQ5M9Q1 402 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 C1orf140Q5VVS0 124 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 ATG16L1Q676U5 607 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 CCDC91Q7Z6B0 441 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 KRT77Q7Z794 578 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 LDLRAD3Q86YD5 345 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 TMEM151AQ8N4L1 468 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 ACTRT1Q8TDG2 376 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 OSBPL9Q96SU4 736 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 SH3GL3Q99963 347 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 DPH5Q9H2P9 285 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 MRPL46Q9H2W6 279 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 MID1IP1Q9NPA3 183 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 VPREB3Q9UKI3 123 aa11.63□□□□□ -0.55
CSNK1D-213ENST00000580446 IGHV1-69DA0A0B4J2H0 117 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 A0A1W2PRX2 142 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 UBL3O95164 117 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 IGHV1-69P01742 117 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 ENO1P06733 434 aaKnown RBP11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 INHBAP08476 426 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 KRT16P08779 473 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 KCNJ10P78508 379 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 FUT5Q11128 374 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 SMU1Q2TAY7 513 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 LIPMQ5VYY2 423 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 SLC27A4Q6P1M0 643 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 C20orf196Q8IYI0 205 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 CADM2Q8N3J6 435 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 CPEB3Q8NE35 698 aaKnown RBP11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 FAM76AQ8TAV0 307 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 THOC1Q96FV9 657 aaKnown RBP11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 FOXB1Q99853 325 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 MRPL57Q9BQC6 102 aaKnown RBP11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 TRIM15Q9C019 465 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 RNF121Q9H920 327 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 PALMDQ9NP74 551 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 FBLN5Q9UBX5 448 aa11.62□□□□□ -0.55
CSNK1D-213ENST00000580446 IGHV3-64DA0A0J9YX35 117 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 PRAMEF27A3QJZ7 478 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 TBX19O60806 448 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 TOX4O94842 621 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 GKN3PP0CG01 181 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 HLA-DOBP13765 273 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 MATN1P21941 496 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 CCNOP22674 350 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 TGFBR2P37173 567 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 RPS5P46782 204 aaKnown RBP11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 FAM201AQ5SY85 155 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 FRRS1Q6ZNA5 592 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 CYS1Q717R9 158 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 ZNF101Q8IZC7 436 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 ZNF283Q8N7M2 679 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 ZNF764Q96H86 408 aaPredicted RBP11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 TXNDC15Q96J42 360 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 CITED2Q99967 270 aaPredicted RBP11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 DPAGT1Q9H3H5 408 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 EXOSC3Q9NQT5 275 aaKnown RBP11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 WDR45Q9Y484 360 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 CCL27Q9Y4X3 112 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 CSMD3Q7Z407 3707 aa11.61□□□□□ -0.55
CSNK1D-213ENST00000580446 A0A1W2PRD5 423 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 A0A1W2PRF3 423 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 A0A1W2PRM7 423 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 POC1B-GALNT4F8VUJ3 575 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 CFLARO15519 480 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 FBXO24O75426 580 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 HPRP00739 348 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 OPN1SWP03999 348 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 OR12D1P0DN82 309 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 LYL1P12980 280 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 SLC6A2P23975 617 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 STX2P32856 288 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 PITPNBP48739 271 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 ETF1P62495 437 aaKnown RBP11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 RPL38P63173 70 aaKnown RBP11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 MOGQ16653 247 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 LYPD2Q6UXB3 125 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 GALNT4Q8N4A0 578 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 OR4F17Q8NGA8 305 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 OR2T11Q8NH01 316 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 SLC25A40Q8TBP6 338 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 ITLN1Q8WWA0 313 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 MAP6Q96JE9 813 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms