RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 C2CD4CQ8TF44 421 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 RP1L1Q8IWN7 2480 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 P2RY10O00398 339 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 CDC42EP2O14613 210 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 RAD51DO75771 328 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 GABRR1P24046 479 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 GPNMBQ14956 572 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 EBPQ15125 230 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 SMUG1Q53HV7 270 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR4K15Q8NH41 348 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 LRIT1Q9P2V4 623 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 ETV7Q9Y603 341 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 PIAS3Q9Y6X2 628 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 CCDC163A0A0D9SF12 145 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 MPEG1Q2M385 716 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 FAM209AQ5JX71 171 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 AVL9Q8NBF6 648 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 PARP12Q9H0J9 701 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 TMEM231Q9H6L2 316 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 MOKQ9UQ07 419 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 A0A1W2PS29 197 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 POM121BA6NF01 834 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 D6RAR5 112 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 NPIPA2E9PIF3 369 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 NPIPA3F8WFD2 350 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 MSL3P1P0C860 447 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 RAB38P57729 211 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 DPTQ07507 201 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 NFATC4Q14934 902 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 DIO2Q92813 273 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 EHFQ9NZC4 300 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 RPH3AQ9Y2J0 694 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 A0A0A6YYD5 115 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 PMP2P02689 132 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 THBS1P07996 1170 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 DIO1P49895 249 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 MMP15P51511 669 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 TAS2R31P59538 309 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 GUCA2AQ02747 115 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 TDGQ13569 410 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 TMEM215Q68D42 235 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 MEX3BQ6ZN04 569 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 DUSP18Q8NEJ0 188 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 FNDC9Q8TBE3 224 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 WDR89Q96FK6 387 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 GPA33Q99795 319 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 C19orf43Q9BQ61 176 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 NXF5Q9H1B4 397 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 PLEKHJ1Q9NW61 149 aa12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 UBE2J1Q9Y385 318 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-207ENST00000580104 QSER1Q2KHR3 1735 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 LOC100289279A0A1B0GTE1 492 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 TMEM235A6NFC5 223 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 PYCARD-AS1I3L0S3 204 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR2T1O43869 369 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZNF43P17038 809 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 SLC6A8P48029 635 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 PXNP49023 591 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 CAPZA1P52907 286 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 SGPP2Q8IWX5 399 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 SLC38A6Q8IZM9 456 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 FAM3CQ92520 227 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 PHYHIPQ92561 330 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 SORCS2Q96PQ0 1159 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 HDAC8Q9BY41 377 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 KCNJ16Q9NPI9 418 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 SIRT3Q9NTG7 399 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 EMC3Q9P0I2 261 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 IDSB3KWA1 339 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 PMS2P2O95744 297 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 SERPINA2P20848 420 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 KCNAB1Q14722 419 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 PEA15Q15121 130 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 RSU1Q15404 277 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 STK11Q15831 433 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 CLPPQ16740 277 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 GLYR1Q49A26 553 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 SLC16A9Q7RTY1 509 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 UEVLDQ8IX04 471 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 RLN3Q8WXF3 142 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR1E3Q8WZA6 343 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 SLAMF9Q96A28 289 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 ARPC5LQ9BPX5 153 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 RBM24Q9BX46 236 aaKnown RBP12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 ATG2BQ96BY7 2078 aa12.46□□□□□ -0.41
TRAPPC8-207ENST00000580104 LANCL1O43813 399 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 CBR1P16152 277 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 POU3F3P20264 500 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 H3F3CQ6NXT2 135 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 STAC2Q6ZMT1 411 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 OR2AK2Q8NG84 335 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 MARC2Q969Z3 335 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 PFDN5Q99471 154 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 DEFB126Q9BYW3 111 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 DLL4Q9NR61 685 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 SLC2A4RGQ9NR83 387 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 POMT2Q9UKY4 750 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 CACNA1IQ9P0X4 2223 aa12.46□□□□□ -0.42
TRAPPC8-207ENST00000580104 A0A1B0GUH1 482 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms