RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 MBD3L4A6NDZ8 208 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 MBD3L3A6NE82 208 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 MBD3L5A6NJ08 208 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 ZNF726A6NNF4 738 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 H7C1C5 153 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 PRRG2O14669 202 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 SS18L1O75177 396 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 TRMUO75648 421 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 ZNF432O94892 652 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 CCDC159P0C7I6 412 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 SLC2A5P22732 501 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 LCN6P62502 163 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 RUNX1T1Q06455 604 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 NFATC3Q12968 1075 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 TMED1Q13445 227 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 EIF2S3LQ2VIR3 472 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 C6orf141Q5SZD1 244 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 OR2A2Q6IF42 318 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 LAIR2Q6ISS4 152 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 ZNF585AQ6P3V2 769 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 CPOQ8IVL8 374 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 MBD3L2Q8NHZ7 208 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 RFKQ969G6 155 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 DOCK7Q96N67 2140 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 NR1H4Q96RI1 486 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 TM9SF2Q99805 663 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 EMC6Q9BV81 110 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 SYT4Q9H2B2 425 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 AASSQ9UDR5 926 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 BLOC1S6Q9UL45 172 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 FKBP7Q9Y680 259 aa14.85□□□□□ -0.03
CDK5RAP3-215ENST00000579780 SLC22A23A1A5C7 686 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 SLC22A31A6NKX4 558 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 FAM183AA6NL82 134 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 SLC1A7O00341 560 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 SLC19A2O60779 497 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 ENTPD6O75354 484 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 AGTR1P30556 359 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 FMO3P31513 532 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 CHN2P52757 468 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 CDH11P55287 796 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 CLRN1P58418 232 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 CSNK2BP67870 215 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 LGALS3BPQ08380 585 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 GUSBP1Q15486 140 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 SLC35D3Q5M8T2 416 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 RBM48Q5RL73 367 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 LCN1P1Q5VSP4 162 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 RTL6Q6ICC9 239 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 DNM1P34Q6PK57 102 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 PLXDC2Q6UX71 529 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 AAED1Q7RTV5 226 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 WDFY1Q8IWB7 410 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 ZNF786Q8N393 782 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 OR2T4Q8NH00 348 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 NMD3Q96D46 503 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 ZFP3Q96NJ6 502 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 HCAR1Q9BXC0 346 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 YTHDF1Q9BYJ9 559 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 RACGAP1Q9H0H5 632 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 RPRD1BQ9NQG5 326 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 PLCXD1Q9NUJ7 323 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 FOXD3Q9UJU5 478 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 NOSIPQ9Y314 301 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 FAM215AQ9Y5M1 114 aa14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 PRRC2CQ9Y520 2896 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-215ENST00000579780 MED12LQ86YW9 2145 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 YES1P07947 543 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 SPI1P17947 270 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 CRABP1P29762 137 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 HTR1FP30939 366 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 CSNK1A1P48729 337 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 SELENOPP49908 381 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 ZNF133P52736 654 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 GABARAPL2P60520 117 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 ZNF91Q05481 1191 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 CAMK2DQ13557 499 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 HIST3H3Q16695 136 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 KCTD21Q4G0X4 260 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 RPTNQ6XPR3 784 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 ZBTB46Q86UZ6 589 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 TUSC5Q8IXB3 177 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 C9orf106Q8NAJ2 232 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 BBS1Q8NFJ9 593 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 OR9Q1Q8NGQ5 310 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 PTP4A1Q93096 173 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 TMEM54Q969K7 222 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 INTS12Q96CB8 462 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 MED20Q9H944 212 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 PARPBPQ9NWS1 579 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 NBEAQ8NFP9 2946 aa14.83□□□□□ -0.04
CDK5RAP3-215ENST00000579780 CCDC182A6NF36 153 aa14.82□□□□□ -0.04
CDK5RAP3-215ENST00000579780 OR6C65A6NJZ3 312 aa14.82□□□□□ -0.04
CDK5RAP3-215ENST00000579780 FAM20BO75063 409 aa14.82□□□□□ -0.04
CDK5RAP3-215ENST00000579780 SLC43A1O75387 559 aa14.82□□□□□ -0.04
CDK5RAP3-215ENST00000579780 TNFAIP8O95379 198 aa14.82□□□□□ -0.04
CDK5RAP3-215ENST00000579780 DBTP11182 482 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-215ENST00000579780 PIPP12273 146 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-215ENST00000579780 APOFQ13790 326 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms