RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 SPIN1Q9Y657 262 aaPredicted RBP9.49□□□□□ -0.89
SUPT4H1-203ENST00000579289 CACNG2Q9Y698 323 aa9.49□□□□□ -0.89
SUPT4H1-203ENST00000579289 TENM3Q9P273 2699 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 PPIAL4EA0A075B759 164 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 TRBV5-3A0A0A0MS03 114 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 PPIAL4CA0A0B4J2A2 164 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 ZNF587BE7ETH6 402 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 PPIAL4DF5H284 164 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 TRAPPC2LH3BP13 241 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 FAAHO00519 579 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 NPIPB7O75200 414 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 PPIAL4FP0DN26 164 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 ANPEPP15144 967 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 OMGP23515 440 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 FPR2P25090 351 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 TACR3P29371 465 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 ARR3P36575 388 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 ACAA2P42765 397 aaKnown RBP9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 CRYBB2P43320 205 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 HTR3AP46098 478 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 UBE2NP61088 152 aaKnown RBP9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 MVKQ03426 396 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 SF3A3Q12874 501 aaKnown RBP eCLIP9.48□□□□□ -0.895e-6■■□□□ 14.3
SUPT4H1-203ENST00000579289 HNRNPA0Q13151 305 aaKnown RBP9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 CEACAM7Q14002 265 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 LARS2Q15031 903 aaKnown RBP9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 TMEM255AQ5JRV8 349 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 DCAF12L2Q5VW00 463 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 DLEU7Q6UYE1 221 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 NHLRC1Q6VVB1 395 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 ZNF440Q8IYI8 595 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 TMIGD2Q96BF3 282 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 SYT3Q9BQG1 590 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 NAA11Q9BSU3 229 aaPredicted RBP9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 ZNF416Q9BWM5 594 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 IKZF5Q9H5V7 419 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 BCL2L10Q9HD36 194 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 PLEK2Q9NYT0 353 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 B3GAT1Q9P2W7 334 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 LEF1Q9UJU2 399 aaPredicted RBP9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 ZNF232Q9UNY5 417 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 TRIM33Q9UPN9 1127 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 POLR3KQ9Y2Y1 108 aaPredicted RBP9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 WIPI2Q9Y4P8 454 aa9.48□□□□□ -0.89
SUPT4H1-203ENST00000579289 DNAH1Q9P2D7 4330 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 C5orf58C9J3I9 102 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 FTCDNL1E5RQL4 147 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 PRG2P13727 222 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 PPIBP23284 216 aaKnown RBP9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 GATA3P23771 443 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 POLR2HP52434 150 aaKnown RBP9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 ROR2Q01974 943 aaKnown RBP9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 BAMBIQ13145 260 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 BEAN1Q3B7T3 259 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 ZNF311Q5JNZ3 666 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 GCNT6Q5T4J0 391 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 KPRPQ5T749 579 aaPredicted RBP9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 RNF220Q5VTB9 566 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 PRAMEF8Q5VWM4 474 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 PRAMEF7Q5VXH5 474 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 C9orf139Q6ZV77 190 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 ZNF627Q7L945 461 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 RETREG3Q86VR2 466 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 ZNF584Q8IVC4 421 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 CADM2Q8N3J6 435 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 KIR3DL3Q8N743 410 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 IL17RDQ8NFM7 739 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 NFKBIDQ8NI38 313 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 TSPAN32Q96QS1 320 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 RBM4BQ9BQ04 359 aaKnown RBP9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 SIKE1Q9BRV8 207 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 SPATA9Q9BWV2 254 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 TMEM120AQ9BXJ8 343 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 PRDM13Q9H4Q3 707 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 CACYBPQ9HB71 228 aaKnown RBP9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 CRLF2Q9HC73 371 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 GPR35Q9HC97 309 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 FGFR1OP2Q9NVK5 253 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 NUP50Q9UKX7 468 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 GMEB1Q9Y692 573 aa9.47□□□□□ -0.89
SUPT4H1-203ENST00000579289 IGLV3-9A0A075B6K5 115 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 EVPLLA8MZ36 301 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 FRS3O43559 492 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 CLPTM1O96005 669 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 UQCRBP14927 111 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 GPX2P18283 190 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 RBMXP38159 391 aaKnown RBP9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 SH3BGRP55822 239 aaPredicted RBP9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 COPZ1P61923 177 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 HOXC5Q00444 222 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 CDK6Q00534 326 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 GUCY1A3Q02108 690 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 RUNDC3AQ59EK9 446 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 METTL21CQ5VZV1 264 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 WBP2NLQ6ICG8 309 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 REEP3Q6NUK4 255 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 ABHD12BQ7Z5M8 362 aaPredicted RBP9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 DHDDSQ86SQ9 333 aa9.46□□□□□ -0.9
SUPT4H1-203ENST00000579289 SERPINA11Q86U17 422 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms