RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 NEU4Q8WWR8 484 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 GTF2H4Q92759 462 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 MAL2Q969L2 176 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 YIPF5Q969M3 257 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CMTM5Q96DZ9 223 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 SPDL1Q96EA4 605 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 TMEM19Q96HH6 336 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 BOD1Q96IK1 185 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ITCHQ96J02 903 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZNF75AQ96N20 296 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 OXGR1Q96P68 337 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 LRRC37BQ96QE4 947 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 TSPAN32Q96QS1 320 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 OR2M2Q96R28 347 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZNF587Q96SQ5 575 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 SH3GL1Q99961 368 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 KATNB1Q9BVA0 655 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 PTDSS2Q9BVG9 487 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 MRPL37Q9BZE1 423 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 PLA2G12AQ9BZM1 189 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 LINC00470Q9BZP3 86 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 MYLK2Q9H1R3 596 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 METTL17Q9H7H0 456 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 TPT1P8Q9HAU6 139 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 DYNLRB1Q9NP97 96 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 MED29Q9NX70 200 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 THUMPD1Q9NXG2 353 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 B3GNT2Q9NY97 397 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 TREM2Q9NZC2 230 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CCDC167Q9P0B6 97 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 SLAMF8Q9P0V8 285 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 MYEF2Q9P2K5 600 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 CRNNQ9UBG3 495 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 P2RX2Q9UBL9 471 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 RPS6KB2Q9UBS0 482 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 REV1Q9UBZ9 1251 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 DUSP13Q9UII6 198 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 LEF1Q9UJU2 399 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 PRDM4Q9UKN5 801 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 RASD1Q9Y272 281 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CMAHPQ9Y471 501 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ANK3Q12955 4377 aaKnown RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 DSPPQ9NZW4 1301 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 IGKV1D-42A0A075B6H8 117 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 A0A096LPI6 279 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 A0A1B0GWA3 101 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ANKRD34BA5PLL1 514 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 SLC22A31A6NKX4 558 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 RPL36A-HNRNPH2H7BZ11 118 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 NDUFAB1O14561 156 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 PRODHO43272 600 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 PPIHO43447 177 aaKnown RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 WIPF1O43516 503 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 TPST2O60704 377 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 CDC14BO60729 498 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ZNF432O94892 652 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 VAMP5O95183 116 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 HTR3BO95264 441 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 CLPTM1O96005 669 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 AVPP01185 164 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 IGKV3-15P01624 115 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 BGLAPP02818 100 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ERCC1P07992 297 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 FAM157BP0CG42 384 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ZNF35P13682 527 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 UQCRBP14927 111 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 B4GALT1P15291 398 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 NQO1P15559 274 aaKnown RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 ZNF14P17017 642 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 GPX2P18283 190 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 NR4A1P22736 598 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 PPIBP23284 216 aaKnown RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 AHCYP23526 432 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 CFPP27918 469 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 HTR2AP28223 471 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 GTF2E2P29084 291 aaKnown RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 THBS2P35442 1172 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ARR3P36575 388 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 MAGEB1P43366 347 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 GPR6P46095 362 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 PTDSS1P48651 473 aaKnown RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 PPOXP50336 477 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 MAP2K6P52564 334 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 CRISP3P54108 245 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 CDH15P55291 814 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 RAB1AP62820 205 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 MYBPC1Q00872 1141 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 MVKQ03426 396 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 MFSD13AQ14CX5 517 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 RGNQ15493 299 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 TAF11Q15544 211 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 OR1Q1Q15612 314 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 GSG1Q2KHT4 349 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 C3orf36Q3SXR2 165 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 PAGE3Q5JUK9 113 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 C6orf10Q5SRN2 563 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 RNF220Q5VTB9 566 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 FAHD2BQ6P2I3 314 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 DLEU7Q6UYE1 221 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 NHLRC1Q6VVB1 395 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms