RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 WDFY1Q8IWB7 410 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 ARIH2OSQ8N7S6 290 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 NOXO1Q8NFA2 376 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 TEX47Q8TBZ9 253 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 Q96M85 177 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 ERMAPQ96PL5 475 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 PSMG3-AS1Q96PY0 264 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 ULBP2Q9BZM5 246 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 PAPOLBQ9NRJ5 636 aaKnown RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 GLTPQ9NZD2 209 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 POFUT2Q9Y2G5 429 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 GPR52Q9Y2T5 361 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 IER3IP1Q9Y5U9 82 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 PCNX1Q96RV3 2341 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 TEX13CA0A0J9YWL9 993 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 CIB4A0PJX0 185 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 H0YHG0 523 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 C19orf84I3L1E1 186 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 PDLIM1O00151 329 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 IMPA2O14732 288 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 ARPC3O15145 178 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 ARHGEF9O43307 516 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 LYZL6O75951 148 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 NR2C1P13056 603 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 OSMP13725 252 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 NOS3P29474 1203 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 DAPP51397 102 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 ROR2Q01974 943 aaKnown RBP12.32□□□□□ -0.44
RPAIN-217ENST00000575711 TGFBR3Q03167 851 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 CD47Q08722 323 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 KRR1Q13601 381 aaKnown RBP12.32□□□□□ -0.44
RPAIN-217ENST00000575711 RCN1Q15293 331 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 SLC36A3Q495N2 470 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 PHYHD1Q5SRE7 291 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 C9orf135Q5VTT2 229 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 BHLHA15Q7RTS1 189 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-217ENST00000575711 SYT14Q8NB59 555 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 STEAP2Q8NFT2 490 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 ZNF519Q8TB69 540 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 FNDC8Q8TC99 324 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 MAGEE2Q8TD90 523 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-217ENST00000575711 HDAC2Q92769 488 aaKnown RBP12.32□□□□□ -0.44
RPAIN-217ENST00000575711 TMEM54Q969K7 222 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 ALG12Q9BV10 488 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 TSSK6Q9BXA6 273 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 OSBPL10Q9BXB5 764 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
RPAIN-217ENST00000575711 PLA2G12AQ9BZM1 189 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 OR10A4Q9H209 315 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 CRLF2Q9HC73 371 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 KRT84Q9NSB2 600 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 REV1Q9UBZ9 1251 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 BAIAP2Q9UQB8 552 aa12.32□□□□□ -0.44
RPAIN-217ENST00000575711 RPL36A-HNRNPH2H7BZ11 118 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 SOCS2O14508 198 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 IDH3BO43837 385 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 TXNDC12O95881 172 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 TP53P04637 393 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-217ENST00000575711 ITGA5P08648 1049 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 IGFBP1P08833 259 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-217ENST00000575711 IGFBP5P24593 272 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 POU1F1P28069 291 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 CCKARP32238 428 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 SH3BGRP55822 239 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-217ENST00000575711 CEACAM16Q2WEN9 425 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 MESTQ5EB52 335 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 ANKRD34AQ69YU3 496 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 LINGO2Q7L985 606 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 ADCK1Q86TW2 530 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 PARP8Q8N3A8 854 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 ZNF433Q8N7K0 673 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-217ENST00000575711 OR2T33Q8NG76 320 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 OR8D4Q8NGM9 314 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 RASD2Q96D21 266 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 RBP7Q96R05 134 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 KCNK17Q96T54 332 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 CIB1Q99828 191 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 RBM4BQ9BQ04 359 aaKnown RBP12.31□□□□□ -0.44
RPAIN-217ENST00000575711 USB1Q9BQ65 265 aaKnown RBP12.31□□□□□ -0.44
RPAIN-217ENST00000575711 RBM4Q9BWF3 364 aaKnown RBP12.31□□□□□ -0.44
RPAIN-217ENST00000575711 ACTR6Q9GZN1 396 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 SMURF2Q9HAU4 748 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 GPR35Q9HC97 309 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
RPAIN-217ENST00000575711 HELZ2Q9BYK8 2649 aaKnown RBP12.31□□□□□ -0.44
RPAIN-217ENST00000575711 TUBAL3A6NHL2 446 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 BHLHE40O14503 412 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 AHCYL1O43865 530 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 RAD51DO75771 328 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 QDPRP09417 244 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 ANPEPP15144 967 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 PPP3CBP16298 524 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 IGFBP2P18065 325 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 CDH2P19022 906 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-217ENST00000575711 FOXG1P55316 489 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-217ENST00000575711 PPP2R2BQ00005 443 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 SNTB1Q13884 538 aaKnown RBP12.3□□□□□ -0.44
RPAIN-217ENST00000575711 TSC22D1Q15714 1073 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 STK11Q15831 433 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 HIST3H3Q16695 136 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms