RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TEKT2Q9UIF3 430 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 ING1Q9UK53 422 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-208ENST00000574755 AK6Q9Y3D8 172 aaKnown RBP12.66□□□□□ -0.38
VPS33B-208ENST00000574755 WIF1Q9Y5W5 379 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 SHISA8B8ZZ34 492 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 H3BML4 177 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 ABHD16AO95870 558 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 IGHMP01871 453 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 HLA-DOBP13765 273 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 ATF1P18846 271 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 SRMP19623 302 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 NPR2P20594 1047 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 RBMS1P29558 406 aaKnown RBP12.65□□□□□ -0.38
VPS33B-208ENST00000574755 EGR3Q06889 387 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 ALKBH1Q13686 389 aaKnown RBP12.65□□□□□ -0.38
VPS33B-208ENST00000574755 OTPQ5XKR4 325 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 LYPD8Q6UX82 237 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 UNQ9370/PRO34162Q6UXP9 181 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 TRILQ7L0X0 811 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-208ENST00000574755 ENKURQ8TC29 256 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 HAVCR2Q8TDQ0 301 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 RNF138Q8WVD3 245 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 PHYHIPQ92561 330 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 ORAI1Q96D31 301 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 SNX18Q96RF0 628 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 RASL10BQ96S79 203 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 MMP28Q9H239 520 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 FRRS1LQ9P0K9 344 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 A0A087WV48 116 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 A0A1B0GVC2 190 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 A6NIN4 97 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 PHYHO14832 338 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 FBXO45P0C2W1 286 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 TFPIP10646 304 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 CASP3P42574 277 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 MAGEB1P43366 347 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 MRPL28Q13084 256 aaKnown RBP12.65□□□□□ -0.38
VPS33B-208ENST00000574755 MFSD13AQ14CX5 517 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 CEP78Q5JTW2 689 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 AGAP6Q5VW22 663 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 MFSD8Q8NHS3 518 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 OTOSQ8NHW6 89 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-208ENST00000574755 NSMAFQ92636 917 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 AGAP4Q96P64 663 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 NECAB3Q96P71 396 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-208ENST00000574755 BRD7Q9NPI1 651 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-208ENST00000574755 CLEC4AQ9UMR7 237 aa12.65□□□□□ -0.38
VPS33B-208ENST00000574755 PTRH2Q9Y3E5 179 aaKnown RBP12.65□□□□□ -0.38
VPS33B-208ENST00000574755 TEX51A0A1B0GUA7 166 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 SLC22A23A1A5C7 686 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 C9J4A7 227 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF593O00488 134 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF208O43345 1280 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 FZD7O75084 574 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 PSKH1P11801 424 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 SNRPBP14678 240 aaKnown RBP12.64□□□□□ -0.39
VPS33B-208ENST00000574755 CTLA4P16410 223 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 MSX1P28360 303 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 PTGDSP41222 190 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 PITPNBP48739 271 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 SELENBP1Q13228 472 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 PCOLCEQ15113 449 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 ETFDHQ16134 617 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 NTRK2Q16620 822 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 LRRC69Q6ZNQ3 347 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 SLC35D2Q76EJ3 337 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 EGFL6Q8IUX8 553 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 TMEM105Q8N8V8 129 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 SCAIQ8N9R8 606 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 OR5H6Q8NGV6 325 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 OR6S1Q8NH40 331 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 ELP5Q8TE02 316 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 SPACA9Q96E40 222 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-208ENST00000574755 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 SLC25A18Q9H1K4 315 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 ABRACLQ9P1F3 81 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 LOC102723996A0A087X1L8 192 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 A0A0B4J203 849 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 PIN1P1O15428 100 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 PRKAR1AP10644 381 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 TCEA1P23193 301 aaKnown RBP12.64□□□□□ -0.39
VPS33B-208ENST00000574755 MAP2K3P46734 347 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 BLVRAP53004 296 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 MC2RQ01718 297 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 TLE3Q04726 772 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 INPP5JQ15735 1006 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-208ENST00000574755 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 H1FNTQ75WM6 255 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-208ENST00000574755 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 DERL3Q96Q80 235 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 AMELYQ99218 206 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 HDHD2Q9H0R4 259 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms