RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ADGRE4PQ86SQ3 457 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 OR6X1Q8NH79 312 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 TSSK2Q96PF2 358 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 CLCF1Q9UBD9 225 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 CLEC4AQ9UMR7 237 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 ZNF175Q9Y473 711 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 SH3D21A4FU49 640 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 PRODHO43272 600 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 TPOP07202 933 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 CDH11P55287 796 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 KLHL12Q53G59 568 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 KCNK17Q96T54 332 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 NMNAT2Q9BZQ4 307 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 NDUFA13Q9P0J0 144 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 KLHL9Q9P2J3 617 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 SLC22A23A1A5C7 686 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 ZNF726A6NNF4 738 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 VGLL3A8MV65 326 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 CXCR4P61073 352 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 ACSF3Q4G176 576 aaPredicted RBP21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 GFRALQ6UXV0 394 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 B3GLCTQ6Y288 498 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 OR51L1Q8NGJ5 315 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 SGCDQ92629 289 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 ZNF566Q969W8 418 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 SLC25A44Q96H78 314 aaPredicted RBP21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 ASB6Q9NWX5 421 aa21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 VSX1Q9NZR4 365 aaPredicted RBP21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 H2AFY2Q9P0M6 372 aaPredicted RBP21.36■■□□□ 1.01
ATPAF1-213ENST00000574428 SVILO95425 2214 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 IGKV3D-15A0A087WSY6 115 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 DCTN6O00399 190 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 ABOP16442 354 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 NTF4P34130 210 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 SELENOPP49908 381 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 ZNF91Q05481 1191 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 RNPS1Q15287 305 aaKnown RBP21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 ZNF773Q6PK81 442 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 HDDC2Q7Z4H3 204 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 P4HA3Q7Z4N8 544 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 CD163Q86VB7 1156 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 GID4Q8IVV7 300 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 MCEMP1Q8IX19 187 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 ZNRF4Q8WWF5 429 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 ADAD1Q96M93 576 aaKnown RBP21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 OR2M2Q96R28 347 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 MRPL13Q9BYD1 178 aaKnown RBP21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 RBM38Q9H0Z9 239 aaKnown RBP21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 CXorf56Q9H5V9 222 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 RERGLQ9H628 205 aa21.35■■□□□ 1.01
ATPAF1-213ENST00000574428 AHRRA9YTQ3 701 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 PTGES3LE9PB15 166 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 IGHG1P01857 330 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 CCDC159P0C7I6 412 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 PGA4P0DJD7 388 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 PGA3P0DJD8 388 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 FCGR2AP12318 317 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 SPI1P17947 270 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 SLC2A5P22732 501 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 EEF1B2P24534 225 aaKnown RBP21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 SLC25A1P53007 311 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 CLRN1P58418 232 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 GABARAPL2P60520 117 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 RPS7P62081 194 aaKnown RBP21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 FMODQ06828 376 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 TUSC5Q8IXB3 177 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 NOXO1Q8NFA2 376 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 RFKQ969G6 155 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 SNX18Q96RF0 628 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 NUAK2Q9H093 628 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 SRA1Q9HD15 236 aaKnown RBP21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 PLCXD1Q9NUJ7 323 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 PAK1IP1Q9NWT1 392 aaPredicted RBP21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 ALPK2Q86TB3 2170 aa21.34■■□□□ 1.01
ATPAF1-213ENST00000574428 FAM171A2A8MVW0 826 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 DBTP11182 482 aaKnown RBP21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 PYCR1P32322 319 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 RPTNQ6XPR3 784 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 MEPCEQ7L2J0 689 aaKnown RBP21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 TMEM123Q8N131 208 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 OR6V1Q8N148 313 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 FAM57AQ8TBR7 257 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 TMIGD2Q96BF3 282 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 WBP1Q96G27 269 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 RNF122Q9H9V4 155 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 CALHM2Q9HA72 323 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 SCN3BQ9NY72 215 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 EMC3Q9P0I2 261 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 BLOC1S6Q9UL45 172 aa21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.33■■□□□ 1.01
ATPAF1-213ENST00000574428 CCDC182A6NF36 153 aa21.33■■□□□ 1
ATPAF1-213ENST00000574428 GPR171O14626 319 aa21.33■■□□□ 1
ATPAF1-213ENST00000574428 ZNF432O94892 652 aa21.33■■□□□ 1
ATPAF1-213ENST00000574428 HTR1FP30939 366 aa21.33■■□□□ 1
ATPAF1-213ENST00000574428 AHSA2Q719I0 299 aa21.33■■□□□ 1
ATPAF1-213ENST00000574428 AAED1Q7RTV5 226 aa21.33■■□□□ 1
ATPAF1-213ENST00000574428 ZNF540Q8NDQ6 660 aa21.33■■□□□ 1
ATPAF1-213ENST00000574428 KISS1RQ969F8 398 aaPredicted RBP21.33■■□□□ 1
ATPAF1-213ENST00000574428 BCO1Q9HAY6 547 aa21.33■■□□□ 1
ATPAF1-213ENST00000574428 PSORS1C1Q9UIG5 152 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms