RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 CCNIQ14094 377 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 MAD2L1BPQ15013 274 aaPredicted RBP7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 NPTX1Q15818 432 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 ADRM1Q16186 407 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 MS4A18Q3C1V0 323 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 TTMPQ5BVD1 217 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 FAM120AOSQ5T036 256 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 TMEM225Q6GV28 225 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 KRT80Q6KB66 452 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 EPGNQ6UW88 154 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 NHLRC1Q6VVB1 395 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 LRP11Q86VZ4 500 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 RBM45Q8IUH3 476 aaKnown RBP7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 ZNF440Q8IYI8 595 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 MIER2Q8N344 545 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 SMYD1Q8NB12 490 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 GLB1L3Q8NCI6 653 aaPredicted RBP7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 PMM1Q92871 262 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 ITCHQ96J02 903 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 FKRPQ9H9S5 495 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 CRLF2Q9HC73 371 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 A4GALTQ9NPC4 353 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 TMEM45AQ9NWC5 275 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 PARPBPQ9NWS1 579 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 CCDC167Q9P0B6 97 aa7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 CRNNQ9UBG3 495 aaPredicted RBP7.96□□□□□ -1.14
NPLOC4-210ENST00000572824 A0A096LPI6 279 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 ARPC4-TTLL3A0A0A6YYG9 625 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 A0A0G2JPF8 293 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 HNRNPCL2B2RXH8 293 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 HNRNPCL3B7ZW38 293 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 hCG_2039718K7EN88 272 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 LMX1BO60663 402 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 HNRNPCL1O60812 293 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 FZD7O75084 574 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 NCR1O76036 304 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 LYPD3O95274 346 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 IGKV3-15P01624 115 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 C8BP07358 591 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 HNRNPCL4P0DMR1 293 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 UQCRBP14927 111 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 TCN1P20061 433 aaPredicted RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 SERPINF1P36955 418 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 CAPZA2P47755 286 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 PDLIM4P50479 330 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 UBE2NP61088 152 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 COPZ1P61923 177 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 SNRPD2P62316 118 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 POU3F1Q03052 451 aaPredicted RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 TGFBR3Q03167 851 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 PIGFQ07326 219 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 SNTB2Q13425 540 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 CAMK2DQ13557 499 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 GNA13Q14344 377 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 LARS2Q15031 903 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 GSTA3Q16772 222 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 BEND6Q5SZJ8 279 aaPredicted RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 GCNT6Q5T4J0 391 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 CYB5R2Q6BCY4 276 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 C6orf89Q6UWU4 347 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 CD300LDQ6UXZ3 194 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 PTOV1Q86YD1 416 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 GPR32P1Q8NGA4 272 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 MFSD8Q8NHS3 518 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 BBS10Q8TAM1 723 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 GTF3AQ92664 365 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 ZNF75AQ96N20 296 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 SNX18Q96RF0 628 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 SYT3Q9BQG1 590 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 CPPED1Q9BRF8 314 aaPredicted RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 PIMREGQ9BSJ6 248 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 MRPL37Q9BZE1 423 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 PLK3Q9H4B4 646 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 NARFLQ9H6Q4 476 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 BCL2L10Q9HD36 194 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 USP22Q9UPT9 525 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 RASD1Q9Y272 281 aa7.95□□□□□ -1.14
NPLOC4-210ENST00000572824 A0A0B4J2E0 115 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 A0A1B0GX12 115 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 OR6C65A6NJZ3 312 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 C11orf98E9PRG8 122 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 KPNA4O00629 521 aaPredicted RBP7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 MED14OSP0DP75 135 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 APEHP13798 732 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 ALDH3B1P43353 468 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 ANXA11P50995 505 aaKnown RBP7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 CRYBA2P53672 197 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 SEC24CP53992 1094 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 CDH12P55289 794 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 MTPNP58546 118 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 ERVS71-1P61550 626 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 SF3A3Q12874 501 aaKnown RBP eCLIP7.94□□□□□ -1.142e-8■■■■□ 20.1
NPLOC4-210ENST00000572824 MELKQ14680 651 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 OR1Q1Q15612 314 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 ALKBH6Q3KRA9 238 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 ALG10BQ5I7T1 473 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 LRIF1Q5T3J3 769 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 PODNL1Q6PEZ8 512 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 SPATA21Q7Z572 469 aa7.94□□□□□ -1.14
NPLOC4-210ENST00000572824 ZNF584Q8IVC4 421 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms