RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DOK4Q8TEW6 326 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SKA2Q8WVK7 121 aaPredicted RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SECTM1Q8WVN6 248 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SSMEM1Q8WWF3 244 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PLEKHA8Q96JA3 519 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 DNAJC1Q96KC8 554 aaKnown RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SGK494Q96LW2 274 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 FAM111AQ96PZ2 611 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 BCL7BQ9BQE9 202 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 MED18Q9BUE0 208 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 OR2B2Q9GZK3 357 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 RMND5AQ9H871 391 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 EVA1AQ9H8M9 152 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 TRIM45Q9H8W5 580 aaPredicted RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 Q9N2K0 584 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 HMG20AQ9NP66 347 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PNO1Q9NRX1 252 aaKnown RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 B3GAT1Q9P2W7 334 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF629Q9UEG4 869 aaPredicted RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 FETUBQ9UGM5 382 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PCYOX1Q9UHG3 505 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PACSIN2Q9UNF0 486 aaPredicted RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 A0A087WXM4 84 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 TRAV34A0A0B4J273 112 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 PRAC2D3DTV9 90 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 ACOX3O15254 700 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 TM9SF1O15321 606 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 RIPK2O43353 540 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 KIAA0513O60268 411 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 LMX1BO60663 402 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 TRAPPC6AO75865 159 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 EPPINO95925 133 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 SNRNP70P08621 437 aaKnown RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 RPS17P08708 135 aaKnown RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 GFAPP14136 432 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 GABRA1P14867 456 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 CD22P20273 847 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 CNR1P21554 472 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 IGFBP5P24593 272 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 PTPN3P26045 913 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 LOXP28300 417 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 CCR7P32248 378 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 SSR4P51571 173 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 CASP9P55211 416 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 DSTNP60981 165 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 SRYQ05066 204 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 MZT1Q08AG7 82 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 SCRN3Q0VDG4 424 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 RPA4Q13156 261 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 FHL1Q13642 323 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 SELPLGQ14242 412 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 TGFBIQ15582 683 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 TMEM249Q2WGJ8 235 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 ACSBG2Q5FVE4 666 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 PRAMEF20Q5VT98 475 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 C1orf146Q5VVC0 180 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 KCTD8Q6ZWB6 473 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 PID1Q7Z2X4 250 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 ARPINQ7Z6K5 226 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF611Q8N823 705 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF321PQ8N8H1 164 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 NFAM1Q8NET5 270 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 RERGQ96A58 199 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 CIDECQ96AQ7 238 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 MOB3AQ96BX8 217 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 VMP1Q96GC9 406 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 PRAP1Q96NZ9 151 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 OR2A5Q96R48 311 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 CITED2Q99967 270 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 EHD1Q9H4M9 534 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 MARCH7Q9H992 704 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 MRPS30Q9NP92 439 aaKnown RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 SERINC1Q9NRX5 453 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF701Q9NV72 531 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 SMOXQ9NWM0 555 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 HPF1Q9NWY4 346 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF223Q9UK11 482 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 NUP50Q9UKX7 468 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 RNF150Q9ULK6 438 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.64□□□□□ -1.67
SF3B3-214ENST00000572365 ERGIC3Q9Y282 383 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 PCDHGB1Q9Y5G3 927 aa4.64□□□□□ -1.67
SF3B3-214ENST00000572365 IGLV5-45A0A087WSX0 123 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 ISPDA4D126 451 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 BOLA2-SMG1P6H3BVE0 249 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 MYO1DO94832 1006 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 VENTXO95231 258 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SHBGP04278 402 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SOD3P08294 240 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 FAM228BP0C875 321 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 TAC1P20366 129 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 PSMA3P25788 255 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 IL12AP29459 219 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 CMPK1P30085 196 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 TLX1P31314 330 aaPredicted RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 RRM2P31350 389 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 FDFT1P37268 417 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 HNF4AP41235 474 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SERPINB10P48595 397 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 HOXA1P49639 335 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms