RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TLX1P31314 330 aaPredicted RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 CASRP41180 1078 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 ZNF234Q14588 700 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 LRRC37A5PQ49AS3 106 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 TRMT12Q53H54 448 aaKnown RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 BEX5Q5H9J7 111 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 NDUFAF7Q7L592 441 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 ANKRD33Q7Z3H0 272 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 TMEM229BQ8NBD8 167 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 MKKSQ9NPJ1 570 aaPredicted RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 FBXO34Q9NWN3 711 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 SPHK1Q9NYA1 384 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 NOP16Q9Y3C1 178 aaKnown RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 EYSQ5T1H1 3165 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 GNB5O14775 395 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 ARPC3O15145 178 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 FGF16O43320 207 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 S100A8P05109 93 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 PCCBP05166 539 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 CRYBA1P05813 215 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 OR8G3PP0DMU2 310 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 CFPP27918 469 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 CMPK1P30085 196 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 KCNJ3P48549 501 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 DHRS2Q13268 280 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 ISXQ2M1V0 245 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 LIPNQ5VXI9 398 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 ZCCHC12Q6PEW1 402 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 FIGNL1Q6PIW4 674 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 SLC16A9Q7RTY1 509 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 OR51D1Q8NGF3 324 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 OR1J2Q8NGS2 313 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 GPX8Q8TED1 209 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 WFIKKN2Q8TEU8 576 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 PPP1R1CQ8WVI7 109 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 THRSPQ92748 146 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 TRIM43Q96BQ3 446 aaPredicted RBP14.03□□□□□ -0.16
SMG6-207ENST00000570756 PTCHD1Q96NR3 888 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 ADAT1Q9BUB4 502 aaKnown RBP14.03□□□□□ -0.16
SMG6-207ENST00000570756 ALG12Q9BV10 488 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 SEC11CQ9BY50 192 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 POLE3Q9NRF9 147 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 FRRS1LQ9P0K9 344 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 TRAV8-7A0A075B6U6 113 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 TRBV5-7A0A0A0MS05 114 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 PRR32B1ATL7 298 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 FADS1O60427 444 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 BRINP1O60477 761 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 UPK3AO75631 287 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 EIF3GO75821 320 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMG6-207ENST00000570756 CPMP14384 443 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 POU3F4P49335 361 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 TOMM20Q15388 145 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 INPP5JQ15735 1006 aaPredicted RBP14.03□□□□□ -0.16
SMG6-207ENST00000570756 TMEM71Q6P5X7 295 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 USP53Q70EK8 1073 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 OR4N5Q8IXE1 308 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 ZNF595Q8IYB9 648 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 GPR148Q8TDV2 347 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 C2CD4CQ8TF44 421 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 FGF13Q92913 245 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 TMEM106AQ96A25 262 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 ARSGQ96EG1 525 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 WNT6Q9Y6F9 365 aa14.03□□□□□ -0.16
SMG6-207ENST00000570756 AMY2AP04746 511 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 FABP1P07148 127 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 ZNF888P0CJ79 500 aaPredicted RBP14.02□□□□□ -0.16
SMG6-207ENST00000570756 CCR2P41597 374 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 PRKXP51817 358 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 EFNB2P52799 333 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 RAB5BP61020 215 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 PDZK1IP1Q13113 114 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 ATXN7L3Q14CW9 347 aaPredicted RBP14.02□□□□□ -0.16
SMG6-207ENST00000570756 FAM209BQ5JX69 171 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 EXOSC6Q5RKV6 272 aaKnown RBP14.02□□□□□ -0.16
SMG6-207ENST00000570756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.02□□□□□ -0.16
SMG6-207ENST00000570756 ZNF676Q8N7Q3 588 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 ZNF614Q8N883 585 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 OR6S1Q8NH40 331 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 TCEAL3Q969E4 200 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 ADAD1Q96M93 576 aaKnown RBP14.02□□□□□ -0.16
SMG6-207ENST00000570756 GPR174Q9BXC1 333 aa14.02□□□□□ -0.16
SMG6-207ENST00000570756 A0A087WV48 116 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 LOC100289279A0A1B0GTE1 492 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 TMEM212A6NML5 194 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 P2RX6O15547 441 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 SGCEO43556 437 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 DNAJB6O75190 326 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 HLA-AP01891 365 aaKnown RBP14.02□□□□□ -0.17
SMG6-207ENST00000570756 TPT1P13693 172 aaKnown RBP14.02□□□□□ -0.17
SMG6-207ENST00000570756 PLAURQ03405 335 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 RAB11BQ15907 218 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 ATPAF1Q5TC12 328 aaPredicted RBP14.02□□□□□ -0.17
SMG6-207ENST00000570756 FHL5Q5TD97 284 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 PRAMEF17Q5VTA0 474 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 ULK3Q6PHR2 472 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 STOML3Q8TAV4 291 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 RXFP4Q8TDU9 374 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 RNF141Q8WVD5 230 aa14.02□□□□□ -0.17
SMG6-207ENST00000570756 ZBTB8AQ96BR9 441 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms