RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 HRO43593 1189 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 MED6O75586 246 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 IFNA17P01571 189 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 FCGR2AP12318 317 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 SPI1P17947 270 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 UBE2NP61088 152 aaKnown RBP14.1□□□□□ -0.15
CIITA-204ENST00000570546 C8orf82Q6P1X6 216 aaPredicted RBP14.1□□□□□ -0.15
CIITA-204ENST00000570546 GLCCI1Q86VQ1 547 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 RSPRY1Q96DX4 576 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 SGCZQ96LD1 299 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 LRFN5Q96NI6 719 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 MICU1Q9BPX6 476 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 KCNJ16Q9NPI9 418 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 KLHL13Q9P2N7 655 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 OR52A1Q9UKL2 312 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 MYO10Q9HD67 2058 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 LTBP4Q8N2S1 1624 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 hCG_1807616A0A1W2PRN6 198 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 ICMTO60725 284 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 ZNF780AO75290 641 aaPredicted RBP14.1□□□□□ -0.15
CIITA-204ENST00000570546 PRKACAP17612 351 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 ADGRF3Q8IZF5 1079 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 IL22RA1Q8N6P7 574 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 SLC37A2Q8TED4 501 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 METTL9Q9H1A3 318 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 LRFN1Q9P244 771 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 TMPRSS11EQ9UL52 423 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 OR51B4Q9Y5P0 310 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 A8MVM7 634 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 CHATP28329 748 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 EFNA3P52797 238 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 CLDN17P56750 224 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 SELENOVP59797 346 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 TIAL1Q01085 375 aaKnown RBP eCLIP14.1□□□□□ -0.15
CIITA-204ENST00000570546 PEA15Q15121 130 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 PARM1Q6UWI2 310 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 TMUB2Q71RG4 321 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 BCORP1Q8N888 145 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 FGGYQ96C11 551 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 ARSGQ96EG1 525 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 A4GNTQ9UNA3 340 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 MN1Q10571 1320 aaPredicted RBP14.1□□□□□ -0.15
CIITA-204ENST00000570546 VSTM5A8MXK1 200 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 PCMT1P22061 227 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 ATP1B3P54709 279 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 C17orf67Q0P5P2 114 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 BCL2A1Q16548 175 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 LIPNQ5VXI9 398 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 MOB3CQ70IA8 216 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 PXT1Q8NFP0 134 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 KCNG3Q8TAE7 436 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 CNRIP1Q96F85 164 aaPredicted RBP14.1□□□□□ -0.15
CIITA-204ENST00000570546 MUTYHQ9UIF7 546 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 ADAM18Q9Y3Q7 739 aa14.1□□□□□ -0.15
CIITA-204ENST00000570546 THSD7AQ9UPZ6 1657 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 SERTM1A2A2V5 107 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 TLCD2A6NGC4 264 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 LALBAP00709 142 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 SERPINE2P07093 398 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 DBHP09172 617 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 SLC51BQ86UW2 128 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 KLHDC8BQ8IXV7 354 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 PRR18Q8N4B5 295 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 NKAIN3Q8N8D7 197 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 OR51S1Q8NGJ8 323 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 EID2BQ96D98 161 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 SELENOIQ9C0D9 397 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 SLC38A1Q9H2H9 487 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 ZMAT3Q9HA38 289 aaKnown RBP14.09□□□□□ -0.15
CIITA-204ENST00000570546 PPIL1Q9Y3C6 166 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 SCN1AP35498 2009 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 MT-ATP6P00846 226 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 POU3F2P20265 443 aaPredicted RBP14.09□□□□□ -0.15
CIITA-204ENST00000570546 HSD17B7P56937 341 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 C1orf140Q5VVS0 124 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 FCRL6Q6DN72 434 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 WDR88Q6ZMY6 472 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 OR2A1Q8NGT9 310 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 DDOQ99489 341 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 CMSS1Q9BQ75 279 aaKnown RBP14.09□□□□□ -0.15
CIITA-204ENST00000570546 PLA2G12AQ9BZM1 189 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 RAB22AQ9UL26 194 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 MED16Q9Y2X0 877 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.09□□□□□ -0.15
CIITA-204ENST00000570546 DIO1P49895 249 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 TPMTP51580 245 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 ABHD17BQ5VST6 288 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 UNQ6126/PRO20091Q6UXV3 157 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 PPP1R3BQ86XI6 285 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 DUSP23Q9BVJ7 150 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 PRAMEF27A3QJZ7 478 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 SOD1P00441 154 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 APLNRP35414 380 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 SELENBP1Q13228 472 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 PRAMEF9Q5VWM5 478 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 DCXRQ7Z4W1 244 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 RNF128Q8TEB7 428 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 BIN3Q9NQY0 253 aa14.09□□□□□ -0.15
CIITA-204ENST00000570546 POM121BA6NF01 834 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms