RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 LOC390937A0A1W2PQ73 354 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 IQCF5A8MTL0 148 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 C9JVG2 144 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 NEDD8-MDP1E9PL57 170 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 H3BNH8 94 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 MANBAO00462 879 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 OR7A17O14581 309 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 LSM1O15116 133 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 ARPC1BO15143 372 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 CLOCKO15516 846 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 TPST1O60507 370 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 MTRF1O75570 445 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 STK16O75716 305 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 NXPH2O95156 264 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 SCELO95171 688 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 CLDN9O95484 217 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 POP4O95707 220 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 FTH1P02794 183 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 FCER2P06734 321 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ALPIP09923 528 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 MPC1LP0DKB6 136 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 PRPS2P11908 318 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 GP9P14770 177 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 PRKACGP22612 351 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ANOS1P23352 680 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 GABRR2P28476 465 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 PDHA2P29803 388 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 PRDX3P30048 256 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 MAT2AP31153 395 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 FCGR2BP31994 310 aaPredicted RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 S100A3P33764 101 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 CAPGP40121 348 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 RPS9P46781 194 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 GNPDA1P46926 289 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 HNMTP50135 292 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 RAG2P55895 527 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ERVPABLB-1P60509 514 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 RPS27AP62979 156 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 RPL38P63173 70 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 CDKL1Q00532 357 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 NAAAQ02083 359 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 CHRNB3Q05901 458 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ZNF33BQ06732 778 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 MERTKQ12866 999 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 APOFQ13790 326 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 DMC1Q14565 340 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 TMEM187Q14656 261 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ABRAXAS2Q15018 415 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 CHRNA6Q15825 494 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ATP6AP1Q15904 470 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ZSWIM7Q19AV6 140 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 NADK2Q4G0N4 442 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 GPRC6AQ5T6X5 926 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 C1orf189Q5VU69 101 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 GLYATQ6IB77 296 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 NANOGP8Q6NSW7 305 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 SBSNQ6UWP8 590 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 GSG1LQ6UXU4 331 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 TPGS1Q6ZTW0 290 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 LRRC70Q7Z2Q7 622 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 NOTCH2NLQ7Z3S9 236 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 CARM1Q86X55 608 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ZNF786Q8N393 782 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 DHRSXQ8N5I4 330 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 OR2AP1Q8NGE2 309 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 OR52B6Q8NGF0 335 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 OR6K2Q8NGY2 324 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ITFG1Q8TB96 612 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 PNPT1Q8TCS8 783 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 SKA2Q8WVK7 121 aaPredicted RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 CYGBQ8WWM9 190 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 STARD8Q92502 1023 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 THRSPQ92748 146 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 PNPLA2Q96AD5 504 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ISG20Q96AZ6 181 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 BIRC7Q96CA5 298 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ITCHQ96J02 903 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 NSMCE3Q96MG7 304 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 RNF145Q96MT1 663 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ZNF641Q96N77 438 aaPredicted RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 CCDC115Q96NT0 180 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ALKBH3Q96Q83 286 aaPredicted RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 SMIM14Q96QK8 99 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 LYSMD1Q96S90 227 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 CGREF1Q99674 301 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 TPPP3Q9BW30 176 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ZNF416Q9BWM5 594 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 RAB11FIP5Q9BXF6 653 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 YTHDF1Q9BYJ9 559 aaKnown RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 WDR13Q9H1Z4 485 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 RIBC2Q9H4K1 309 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ELOVL6Q9H5J4 265 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 RMND5AQ9H871 391 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 NANOGQ9H9S0 305 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 PARVBQ9HBI1 364 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 LRTM1Q9HBL6 345 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 IL26Q9NPH9 171 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 AGPAT4Q9NRZ5 378 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 CENPMQ9NSP4 180 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 C1orf109Q9NX04 203 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms