RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ZFAND2BQ8WV99 257 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.3□□□□□ -0.76
CAPN3-220ENST00000569827 BCL2L10Q9HD36 194 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 A4GALTQ9NPC4 353 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 B3GAT2Q9NPZ5 323 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 SLC25A37Q9NYZ2 338 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 SLAMF8Q9P0V8 285 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 SLC7A8Q9UHI5 535 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 TRAV20A0A0B4J274 112 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 PLPP3O14495 311 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 DEAF1O75398 565 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-220ENST00000569827 UBL3O95164 117 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 LCKP06239 509 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 ZCCHC18P0CG32 403 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 ADORA3P0DMS8 318 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 IDO1P14902 403 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 HOXB9P17482 250 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-220ENST00000569827 ARFIP2P53365 341 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 CDH12P55289 794 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 RGS8P57771 180 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-220ENST00000569827 NCALDP61601 193 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 RPS23P62266 143 aaKnown RBP10.29□□□□□ -0.76
CAPN3-220ENST00000569827 MYBPC1Q00872 1141 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 CEP85LQ5SZL2 805 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 MSRB3Q8IXL7 192 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 LSMEM1Q8N8F7 131 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 ZDHHC22Q8N966 263 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 ADPRHL1Q8NDY3 354 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 SLC30A7Q8NEW0 376 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 GTF2H4Q92759 462 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 SLC41A3Q96GZ6 507 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 TMEM109Q9BVC6 243 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 ZNF416Q9BWM5 594 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 ASPNQ9BXN1 380 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 IKZF5Q9H5V7 419 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 RMND5AQ9H871 391 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 C12orf10Q9HB07 376 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 WIPI2Q9Y4P8 454 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 CORINQ9Y5Q5 1042 aa10.29□□□□□ -0.76
CAPN3-220ENST00000569827 A0A0B4J2E0 115 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 LOC102725191A0A1B0GVB3 256 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 A0A1B0GX12 115 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 TRPC5OSA6NMA1 111 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 C17orf100A8MU93 164 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 M0R3H8 397 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 KPNA4O00629 521 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 TPD52L2O43399 206 aaKnown RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 SNNO75324 88 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 ARAFP10398 606 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 MAKP20794 623 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 PRKAR1BP31321 381 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 LSP1P33241 339 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 TMEM33P57088 247 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 RBBP4Q09028 425 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 SPRNQ5BIV9 151 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 TMEM255AQ5JRV8 349 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 SPATA46Q5T0L3 261 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 GCNT6Q5T4J0 391 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 TMEM154Q6P9G4 183 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 ULK3Q6PHR2 472 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 USP51Q70EK9 711 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 ZNF627Q7L945 461 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 C1QL2Q7Z5L3 287 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 BPIFB2Q8N4F0 458 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 LRRC17Q8N6Y2 441 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 SGMS2Q8NHU3 365 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 DNAJA4Q8WW22 397 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 ZMYND19Q96E35 227 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 SLC47A1Q96FL8 570 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 LRR1Q96L50 414 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 RBM4Q9BWF3 364 aaKnown RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 RNF121Q9H920 327 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 SSU72Q9NP77 194 aaKnown RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 SDR39U1Q9NRG7 319 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 MRPL39Q9NYK5 338 aaKnown RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 ZIM2Q9NZV7 527 aa10.28□□□□□ -0.76
CAPN3-220ENST00000569827 ZNF346Q9UL40 294 aaKnown RBP10.28□□□□□ -0.76
CAPN3-220ENST00000569827 NOTCH1P46531 2555 aa10.27□□□□□ -0.76
CAPN3-220ENST00000569827 IGHV1-69-2A0A0G2JMI3 117 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 A0A0G2JMP0 313 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 A0A0X1KG70 313 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 UBDO15205 165 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 IGHV2-5P01817 119 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 OPN1SWP03999 348 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 SERPINA5P05154 406 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 OR8G3PP0DMU2 310 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 BMP2P12643 396 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 ETS2P15036 469 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 KLF3P57682 345 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-220ENST00000569827 UBA52P62987 128 aaKnown RBP10.27□□□□□ -0.77
CAPN3-220ENST00000569827 LCN2P80188 198 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 CDK6Q00534 326 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 ZP4Q12836 540 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 DCAF12L2Q5VW00 463 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 REP15Q6BDI9 236 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 ACSM5Q6NUN0 579 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 DHRS4L2Q6PKH6 230 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 C5orf46Q6UWT4 87 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 SLC35D2Q76EJ3 337 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 NET1Q7Z628 596 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms