RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 HOXA9P31269 272 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 KDELR2P33947 212 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 RBM34P42696 430 aaKnown RBP3.84□□□□□ -1.79
CHD9-220ENST00000569794 CSNK1A1P48729 337 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 VBP1P61758 197 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 DR1Q01658 176 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 ZNF85Q03923 595 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 ZNF33BQ06732 778 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 SLAMF1Q13291 335 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 TRAM2Q15035 370 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 SF3A2Q15428 464 aaKnown RBP3.84□□□□□ -1.79
CHD9-220ENST00000569794 UAP1Q16222 522 aaPredicted RBP3.84□□□□□ -1.79
CHD9-220ENST00000569794 TIGITQ495A1 244 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 THEM4Q5T1C6 240 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 MFSD14CQ5VZR4 134 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 LIX1Q8N485 282 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 EID2Q8N6I1 236 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 SNX31Q8N9S9 440 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 OR6N2Q8NGY6 317 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 FANK1Q8TC84 345 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 LGALS14Q8TCE9 139 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 IL1F10Q8WWZ1 152 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 MRPS31Q92665 395 aaKnown RBP3.84□□□□□ -1.79
CHD9-220ENST00000569794 NEIL2Q969S2 332 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 FAM173AQ9BQD7 235 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 ZYG11BQ9C0D3 744 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 SIX2Q9NPC8 291 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 SIRT7Q9NRC8 400 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 NECAP2Q9NVZ3 263 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 THUMPD1Q9NXG2 353 aaKnown RBP3.84□□□□□ -1.79
CHD9-220ENST00000569794 NAGKQ9UJ70 344 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 PLEKHH1Q9ULM0 1364 aa3.84□□□□□ -1.79
CHD9-220ENST00000569794 SCRIBQ14160 1630 aa3.84□□□□□ -1.8
CHD9-220ENST00000569794 TRBV7-9A0A0J9YWB2 115 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 SLC22A20A6NK97 555 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 OR5B21A6NL26 309 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 ZNF724A8MTY0 619 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 MKRN2OSH3BPM6 223 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 PRMT5O14744 637 aaPredicted RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 NADKO95544 446 aaPredicted RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 CLIC3O95833 236 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 CD160O95971 181 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 GPIP06744 558 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 KLK1P06870 262 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 FRMD6-AS1P0C7T7 363 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 TRIM49P0CI25 452 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 TRIM49CP0CI26 452 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 PET100P0DJ07 73 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 SDC1P18827 310 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 SERPINA2P20848 420 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 MAGP20916 626 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 CNR1P21554 472 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 FOXN2P32314 431 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 UGT1A3P35503 534 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 LEPP41159 167 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 NBL1P41271 181 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 TNFSF9P41273 254 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 RANBP1P43487 201 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 KPNA2P52292 529 aaKnown RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 PRPS1P60891 318 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 STX5Q13190 355 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 OR5I1Q13606 314 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 SERTAD2Q14140 314 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 GNMTQ14749 295 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 OXA1LQ15070 435 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 UPP1Q16831 310 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 KCTD19Q17RG1 926 aaPredicted RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 RGS21Q2M5E4 152 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 QRICH1Q2TAL8 776 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 TPRG1LQ5T0D9 272 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 DCST2Q5T1A1 773 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 KHDRBS2Q5VWX1 349 aaKnown RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 OR52E8Q6IFG1 317 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 ADNP2Q6IQ32 1131 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 RFWD3Q6PCD5 774 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 TIPARPQ7Z3E1 657 aaKnown RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 OR2W3Q7Z3T1 314 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 CMC1Q7Z7K0 106 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 STX12Q86Y82 276 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 ACOT4Q8N9L9 421 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 OR1S2Q8NGQ3 325 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 ACER1Q8TDN7 264 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 SETD7Q8WTS6 366 aaKnown RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 PCNPQ8WW12 178 aaKnown RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 BAALCQ8WXS3 180 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 NDRG1Q92597 394 aaKnown RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 CCDC127Q96BQ5 260 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 NTNG2Q96CW9 530 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 HSFY1Q96LI6 401 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 ZFP3Q96NJ6 502 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 TNFRSF13CQ96RJ3 184 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 DCUN1D5Q9BTE7 237 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 NAT10Q9H0A0 1025 aaKnown RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 DEFB129Q9H1M3 183 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 NEUROG2Q9H2A3 272 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 SYT4Q9H2B2 425 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 NT5DC2Q9H857 520 aa3.83□□□□□ -1.8
CHD9-220ENST00000569794 ELL3Q9HB65 397 aaPredicted RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 EML4Q9HC35 981 aaKnown RBP3.83□□□□□ -1.8
CHD9-220ENST00000569794 NTNG1Q9Y2I2 539 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms