RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 NOL11Q9H8H0 719 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-217ENST00000569429 TCF7L2Q9NQB0 619 aa5.37□□□□□ -1.55
HERPUD1-217ENST00000569429 FARSBQ9NSD9 589 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-217ENST00000569429 VPS29Q9UBQ0 182 aa5.37□□□□□ -1.55
HERPUD1-217ENST00000569429 KCNG2Q9UJ96 466 aa5.37□□□□□ -1.55
HERPUD1-217ENST00000569429 TMED7-TICAM2A0A0A6YYA0 188 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 TMEM72A0PK05 275 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 IFNL4K9M1U5 179 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 PEX14O75381 377 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 CYP7B1O75881 506 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 PAHP00439 452 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 VAMP1P23763 118 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 CDC25BP30305 580 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 ARL1P40616 181 aaPredicted RBP5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 HTR3AP46098 478 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 CCNG1P51959 295 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 ALDH18A1P54886 795 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 NFYCQ13952 458 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 CEACAM7Q14002 265 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 ZNF404Q494X3 552 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 SGO1Q5FBB7 561 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 NOXRED1Q6NXP6 359 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 KCTD18Q6PI47 426 aaPredicted RBP5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 LIAT1Q6ZQX7 453 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 ZNF551Q7Z340 670 aaPredicted RBP5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 PDZD9Q8IXQ8 264 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 SYCE1Q8N0S2 351 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 NAT8LQ8N9F0 302 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 BEND2Q8NDZ0 799 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 SLC30A7Q8NEW0 376 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 OR1J1Q8NGS3 322 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 SELENOMQ8WWX9 145 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 ATP6V1E2Q96A05 226 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 TSPAN17Q96FV3 270 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 OTUB1Q96FW1 271 aaPredicted RBP5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 OSBPL9Q96SU4 736 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 SSX3Q99909 188 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 FAM234AQ9H0X4 552 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 C1orf198Q9H425 327 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 PIGUQ9H490 435 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 CAB39LQ9H9S4 337 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 CDH20Q9HBT6 801 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 TBK1Q9UHD2 729 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 PPP1R3CQ9UQK1 317 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 RASD1Q9Y272 281 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 TMED7Q9Y3B3 224 aa5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 TNPO3Q9Y5L0 923 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-217ENST00000569429 A0A1B0GVI7 797 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 TCRBV4S1A1TA0A5B7 111 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 ZC3H12DA2A288 527 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 SYCE1LA8MT33 242 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 PPP6CO00743 305 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 SLC22A3O75751 556 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 CSTAP01040 98 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 UBTFL6P0CB48 400 aaPredicted RBP5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 HSD3B1P14060 373 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 STMN1P16949 149 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 CCNA2P20248 432 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 TNFSF4P23510 183 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 HSD3B2P26439 372 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 PSMB10P40306 273 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 CRATP43155 626 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 CLDN17P56750 224 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 C2orf80Q0P641 193 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 HSPB3Q12988 150 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 FRG1Q14331 258 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 OR7A5Q15622 319 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 ZKSCAN8Q15776 578 aaPredicted RBP5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 LY6EQ16553 131 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 AANATQ16613 207 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 PFKFB4Q16877 469 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 PDZK1Q5T2W1 519 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 MBNL2Q5VZF2 373 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 AP1ARQ63HQ0 302 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 FAM71E1Q6IPT2 247 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 ETV3LQ6ZN32 361 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 IGDCC3Q8IVU1 814 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 CCDC170Q8IYT3 715 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 RPP25LQ8N5L8 163 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 ICA1LQ8NDH6 482 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 PIK3C3Q8NEB9 887 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 FAM71CQ8NEG0 241 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 OR5AU1Q8NGC0 362 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 DCAKDQ8WVC6 231 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 CDS1Q92903 461 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 ITCHQ96J02 903 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 MAGEB18Q96M61 343 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 ZNF382Q96SR6 550 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 IQCGQ9H095 443 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 MUC13Q9H3R2 512 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 RNF121Q9H920 327 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 NMRAL1Q9HBL8 299 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 MSL2Q9HCI7 577 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 MIEF1Q9NQG6 463 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 MRPL15Q9P015 296 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 B3GAT1Q9P2W7 334 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 RNF14Q9UBS8 474 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 IL19Q9UHD0 177 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 OSGIN1Q9UJX0 560 aa5.35□□□□□ -1.55
HERPUD1-217ENST00000569429 SNX6Q9UNH7 406 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms