RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 SURF4O15260 269 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 EIF1BO60739 113 aaKnown RBP11□□□□□ -0.65
TMEM170A-205ENST00000568559 CLUP10909 449 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 SPINK2P20155 84 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 RORCP51449 518 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 HSF2Q03933 536 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 NKAPLQ5M9Q1 402 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 C1QL3Q5VWW1 255 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 SLC22A16Q86VW1 577 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 SLC7A5P1Q8MH63 180 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 SLC43A2Q8N370 569 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 FNDC8Q8TC99 324 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 RPL3LQ92901 407 aaKnown RBP11□□□□□ -0.65
TMEM170A-205ENST00000568559 ZNF566Q969W8 418 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 TSSK2Q96PF2 358 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 OR5M11Q96RB7 305 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 MICU1Q9BPX6 476 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 ZNF700Q9H0M5 742 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 SLC26A1Q9H2B4 701 aa11□□□□□ -0.65
TMEM170A-205ENST00000568559 FAM172BPA6NC97 362 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 COX6A1P12074 109 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 ENPP1P22413 925 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 DSCR4P56555 118 aaPredicted RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 RPL27P61353 136 aaKnown RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 TIGD3Q6B0B8 471 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 JMJD6Q6NYC1 403 aaPredicted RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 STK35Q8TDR2 534 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 OIT3Q8WWZ8 545 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 FAM71F1Q96KD3 344 aaPredicted RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 C4orf36Q96KX1 117 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 GPA33Q99795 319 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 SLC25A18Q9H1K4 315 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 PARPBPQ9NWS1 579 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 PCNX2A6NKB5 2137 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 ANKRD61A6NGH8 418 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 CENPBD1B2RD01 187 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 SNPHO15079 494 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 TO15178 435 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 IFNA6P05013 189 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 RAB40ALP0C0E4 278 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 CD82P27701 267 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 EIF2B1Q14232 305 aaKnown RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 WIPI1Q5MNZ9 446 aaPredicted RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 VHLLQ6RSH7 139 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 THSD4Q6ZMP0 1018 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 MOGAT1Q96PD6 335 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 DUSP21Q9H596 190 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 MED29Q9NX70 200 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 PMF1-BGLAPU3KQ54 211 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 ZNF106Q9H2Y7 1883 aaKnown RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 DENND4AQ7Z401 1863 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 CCDC182A6NF36 153 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 GSTT2P0CG29 244 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 GSTT2BP0CG30 244 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 FKBP2P26885 142 aaKnown RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 SDHAP31040 664 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 RIDAP52758 137 aaKnown RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 PPIAP62937 165 aaKnown RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 ZNF322Q6U7Q0 402 aaPredicted RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 PLET1Q6UQ28 207 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 TIPARPQ7Z3E1 657 aaKnown RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 CEACAM19Q7Z692 300 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 TMED4Q7Z7H5 227 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 KIF18BQ86Y91 864 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 OR8D4Q8NGM9 314 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 ZBTB8AQ96BR9 441 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 OR51E2Q9H255 320 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 MEPEQ9NQ76 525 aaPredicted RBP10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 PCDHGB6Q9Y5F9 930 aa10.99□□□□□ -0.65
TMEM170A-205ENST00000568559 PMS2P1A4D2B8 440 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 MEIS3P1A6NDR6 274 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 A6NLC8 198 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 ZNF891A8MT65 544 aaPredicted RBP10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 C9orf172C9J069 976 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 ARL6IP5O75915 188 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 RGS6P49758 472 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 HSF1Q00613 529 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 NIPAL3Q6P499 406 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 DPY19L4Q7Z388 723 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 ATG4DQ86TL0 474 aaPredicted RBP10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 TMEM99Q8N816 258 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 NEIL3Q8TAT5 605 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 TMEM41AQ96HV5 264 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 REV1Q9UBZ9 1251 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 A0A087WZY1 265 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 LOC101059948A0A1B0GTJ6 334 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 SLC2A1P11166 492 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 PSKH1P11801 424 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 CD97P48960 835 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 MLF1P58340 268 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 CDK5Q00535 292 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 C12orf73Q69YU5 71 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 PAMR1Q6UXH9 720 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 CD300LDQ6UXZ3 194 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 TSEN54Q7Z6J9 526 aaKnown RBP10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 ARIH2OSQ8N7S6 290 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 FAM46BQ96A09 425 aa10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 NARS2Q96I59 477 aaKnown RBP10.98□□□□□ -0.65
TMEM170A-205ENST00000568559 ULBP2Q9BZM5 246 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms