RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 RPP14O95059 124 aaKnown RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 TIMP1P01033 207 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 APOA1P02647 267 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CSF2P04141 144 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CA3P07451 260 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 STSP08842 583 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 HSMCR30P0CW71 290 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 RRASP10301 218 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 RALBP11234 206 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 BCKDHAP12694 445 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 PPP1R2P41236 205 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 GBX2P52951 348 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 ARFIP1P53367 373 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 SUCLG1P53597 346 aaKnown RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 CDH6P55285 790 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 ATP5IP56385 69 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 MYL6P60660 151 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 RPS8P62241 208 aaKnown RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 ENPEPQ07075 957 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 BCL2L1Q07817 233 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 ST3GAL3Q11203 375 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CDC20Q12834 499 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 FADDQ13158 208 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 DGCR6Q14129 220 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CHRNA6Q15825 494 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 USF2Q15853 346 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 TPD52L1Q16890 204 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 LINC01620Q4KN68 170 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 DNAL1Q4LDG9 190 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 HES5Q5TA89 166 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 OTPQ5XKR4 325 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 PPP1R2P3Q6NXS1 205 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 RBM43Q6ZSC3 357 aaKnown RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 LANCL3Q6ZV70 420 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 Q6ZVH6 145 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 USP50Q70EL3 339 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 FRA10AC1Q70Z53 315 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 UTS2BQ765I0 119 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 ERASQ7Z444 233 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 SYVN1Q86TM6 617 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 LRRC6Q86X45 466 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 PLA2G4DQ86XP0 818 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CLVS1Q8IUQ0 354 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 PSTKQ8IV42 348 aaKnown RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 SLC22A9Q8IVM8 553 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 IQCKQ8N0W5 287 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 LINC01561Q8N1V8 128 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CCNYL1Q8N7R7 359 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 ZNF680Q8NEM1 530 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 OR10H4Q8NGA5 316 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 OR2A12Q8NGT7 310 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 GRPEL2Q8TAA5 225 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 M1APQ8TC57 530 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CAPSLQ8WWF8 208 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 PYDC1Q8WXC3 89 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 RAB7BQ96AH8 199 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 TPD52L3Q96J77 140 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 VSTM2LQ96N03 204 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CYTH2Q99418 400 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 BCL7BQ9BQE9 202 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 MTG1Q9BT17 334 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 POLR3FQ9H1D9 316 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 PRO3102Q9H379 93 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 RIBC2Q9H4K1 309 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 METTL8Q9H825 291 aaKnown RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 ECT2Q9H8V3 914 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 COG4Q9H9E3 785 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 NTN4Q9HB63 628 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 SPACA1Q9HBV2 294 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CD209Q9NNX6 404 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 RHBDL2Q9NX52 303 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 RAB20Q9NX57 234 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 NKIRAS1Q9NYS0 192 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 UXTQ9UBK9 157 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 DNAJC12Q9UKB3 198 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 NUP50Q9UKX7 468 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 ASB3Q9Y575 518 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CLCA3PQ9Y6N3 262 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 MGAMO43451 1857 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CACNA1HO95180 2353 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 DLG5Q8TDM6 1919 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 SPTBN5Q9NRC6 3674 aaKnown RBP2.57□□□□□ -2
HERPUD1-212ENST00000567944 DUOX1Q9NRD9 1551 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 LOC105371267A0A1B0GV96 52 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 SMIM23A6NLE4 172 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 K7EPI3 171 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 PSMD11O00231 422 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 RASGRF2O14827 1237 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 PFDN6O15212 129 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 EIF3HO15372 352 aaKnown RBP eCLIP2.57□□□□□ -2
HERPUD1-212ENST00000567944 SMPD2O60906 423 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 WBP4O75554 376 aaKnown RBP2.57□□□□□ -2
HERPUD1-212ENST00000567944 LYPLA1O75608 230 aaPredicted RBP2.57□□□□□ -2
HERPUD1-212ENST00000567944 OTCP00480 354 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 SNRPAP09012 282 aaKnown RBP2.57□□□□□ -2
HERPUD1-212ENST00000567944 MCF2P10911 925 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 ANXA3P12429 323 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 IGLL1P15814 213 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 F8A1P23610 371 aa2.57□□□□□ -2
HERPUD1-212ENST00000567944 ADORA2BP29275 332 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms