RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 H1FNTQ75WM6 255 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 SLC35F2Q8IXU6 374 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 GTPBP8Q8N3Z3 284 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 TMEM99Q8N816 258 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 WDSUB1Q8N9V3 476 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 ATP6V1C2Q8NEY4 427 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 SPRYD4Q8WW59 207 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 BORCS5Q969J3 196 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 CENPOQ9BU64 300 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 ALG12Q9BV10 488 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 SLIRPQ9GZT3 109 aaKnown RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 CHST11Q9NPF2 352 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF346Q9UL40 294 aaKnown RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 VDAC3Q9Y277 283 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 HDGFL3Q9Y3E1 203 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 FKBP7Q9Y680 259 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 DNHD1Q96M86 4753 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 CENPEQ02224 2701 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 OTOGQ6ZRI0 2925 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 TRDV1A0A1B0GX56 115 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 A0A1W2PNV4 684 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 C2orf72A6NCS6 295 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 LIPT2A6NK58 231 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 IL1AP01583 271 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 P04436 131 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 F13BP05160 661 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 TFPIP10646 304 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 CLUP10909 449 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF17P17021 662 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 GRNP28799 593 aaKnown RBP13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF239Q16600 458 aaKnown RBP13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF404Q494X3 552 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 MESTQ5EB52 335 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ACER2Q5QJU3 275 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 SLC6A19Q695T7 634 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 SLC16A9Q7RTY1 509 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 HDDC2Q7Z4H3 204 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 MCFD2Q8NI22 146 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF417Q8TAU3 575 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF519Q8TB69 540 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ZMYND19Q96E35 227 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF587Q96SQ5 575 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-221ENST00000567935 MED18Q9BUE0 208 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 WDR12Q9GZL7 423 aaKnown RBP13.13□□□□□ -0.31
COMMD4-221ENST00000567935 NXF2Q9GZY0 626 aaKnown RBP13.13□□□□□ -0.31
COMMD4-221ENST00000567935 HMG20AQ9NP66 347 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 ABI3Q9P2A4 366 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 POLHQ9Y253 713 aa13.13□□□□□ -0.31
COMMD4-221ENST00000567935 SF3B6Q9Y3B4 125 aaKnown RBP13.13□□□□□ -0.31
COMMD4-221ENST00000567935 PRSS37A4D1T9 235 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 METTL15A6NJ78 407 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 HSPB2A8KAH6 182 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 CENPBD1B2RD01 187 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 B4DXG7 233 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 PHYHO14832 338 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 CBR3O75828 277 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 GYPBP06028 91 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 CD1AP06126 327 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 INHBBP09529 407 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 LIFP15018 202 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 DOC2BQ14184 412 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF846Q147U1 533 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 HSPB2Q16082 182 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 ACKR1Q16570 336 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 KRTAP21-3Q3LHN1 58 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 CDONQ4KMG0 1287 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 LINC01590Q5TEZ4 76 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 PRAMEF20Q5VT98 475 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 EEF1A1P5Q5VTE0 462 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 TIGD3Q6B0B8 471 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 KCTD20Q7Z5Y7 419 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 PXKQ7Z7A4 578 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 DTX1Q86Y01 620 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 OR1J4Q8NGS1 313 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 OR6K6Q8NGW6 343 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 POC1BQ8TC44 478 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 ADAMTS17Q8TE56 1095 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 FER1L6-AS2Q96M78 137 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 KCTD7Q96MP8 289 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 KCNN2Q9H2S1 579 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 RPRD1BQ9NQG5 326 aaKnown RBP13.12□□□□□ -0.31
COMMD4-221ENST00000567935 VSX1Q9NZR4 365 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-221ENST00000567935 FBXL2Q9UKC9 423 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 TRAPPC4Q9Y296 219 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 TMEM14AQ9Y6G1 99 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 MED13Q9UHV7 2174 aa13.12□□□□□ -0.31
COMMD4-221ENST00000567935 A0A075B6Q4 140 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 CLDN25C9JDP6 229 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 ARHGEF9O43307 516 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 PLPP2O43688 288 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 MRPL3P09001 348 aaKnown RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 CCL3P10147 92 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 CELP19835 753 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 GNLYP22749 145 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 AHCYP23526 432 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms