RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SERPINI2O75830 405 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 KRT34O76011 436 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SEC14L2O76054 403 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 OR5F1O95221 314 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 MT-ND1P03886 318 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 CELA3BP08861 270 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 OR4A8P0C604 315 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 THRBP10828 461 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 UMPSP11172 480 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 CD79AP11912 226 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 IFNGR1P15260 489 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SLC25A16P16260 332 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 CALCRP30988 508 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 KDELR2P33947 212 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SERPINF1P36955 418 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 MDH1P40925 334 aaKnown RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 CAPZA2P47755 286 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 CSNK1A1P48729 337 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 PPOXP50336 477 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 IDH3GP51553 393 aaPredicted RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 BIDP55957 195 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 TAS2R41P59536 307 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SF3A3Q12874 501 aaKnown RBP eCLIP4.15□□□□□ -1.75
CLK3-219ENST00000567805 NPRL3Q12980 569 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 EFNB3Q15768 340 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ADIPOQQ15848 244 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 GSG1Q2KHT4 349 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 MST1LQ2TV78 715 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ZNF813Q6ZN06 617 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SLC35D2Q76EJ3 337 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SLC46A3Q7Z3Q1 461 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 PIWIL3Q7Z3Z3 882 aaKnown RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 HDDC2Q7Z4H3 204 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 NANOGNBQ7Z5D8 188 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ARPINQ7Z6K5 226 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 MDP1Q86V88 176 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 MYPOPQ86VE0 399 aaPredicted RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 CARM1Q86X55 608 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 MICU2Q8IYU8 434 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 LRRC17Q8N6Y2 441 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ZNF525Q8N782 197 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 OR2T12Q8NG77 320 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 OR6N1Q8NGY5 312 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 RP9Q8TA86 221 aaKnown RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 C10orf105Q8TEF2 133 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 C10orf82Q8WW14 230 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 FAM168AQ92567 244 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 HTRA1Q92743 480 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 TMEM54Q969K7 222 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ZNF566Q969W8 418 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SLC25A44Q96H78 314 aaPredicted RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 TXNDC15Q96J42 360 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SORCS2Q96PQ0 1159 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 FOXB1Q99853 325 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 PRSS27Q9BQR3 290 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 PLK3Q9H4B4 646 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ZNF442Q9H7R0 627 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 SEC61A2Q9H9S3 476 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 MYOZ1Q9NP98 299 aaPredicted RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 MEPEQ9NQ76 525 aaPredicted RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 B3GNT2Q9NY97 397 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 GLTPQ9NZD2 209 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 RIMS3Q9UJD0 308 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 FBXL3Q9UKT7 428 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 POFUT2Q9Y2G5 429 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 FN1P02751 2386 aaKnown RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 ALPK2Q86TB3 2170 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 HIVEP2P31629 2446 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 FBN1P35555 2871 aaKnown RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 TLN2Q9Y4G6 2542 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 A0A096LNT2 108 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 KRTAP9-6A0A140TA67 174 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 LOC390937A0A1W2PQ73 354 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 A0A1W2PRG6 482 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 HTR3EA5X5Y0 456 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 NPIPB13A6NJU9 1138 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 CENPBD1B2RD01 187 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 NPIPB4C9JG80 1138 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 MCIDASD6RGH6 385 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 BLOC1S5-TXNDC5H3BN57 136 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 hCG_2039718K7EN88 272 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 CCDC22O60826 627 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 SHOX2O60902 331 aaPredicted RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 CRLF1O75462 422 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 OR7A10O76100 309 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 UBL3O95164 117 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 FARS2O95363 451 aaKnown RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 RAB36O95755 333 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 BCL10O95999 233 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 IGHG1P01857 330 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 HLA-HP01893 362 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 ERCC1P07992 297 aaPredicted RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 TSPAN19P0C672 248 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 PGA4P0DJD7 388 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 PGA3P0DJD8 388 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 COX4I1P13073 169 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 ZNF35P13682 527 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 B4GALT1P15291 398 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 ZNF14P17017 642 aaPredicted RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 FUT1P19526 365 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms