RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 LAPTM4AQ15012 233 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 TIMM23BQ5SRD1 257 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 GPR139Q6DWJ6 353 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF770Q6IQ21 691 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-208ENST00000567250 SHQ1Q6PI26 577 aaKnown RBP10.72□□□□□ -0.69
SF3B3-208ENST00000567250 NHLRC1Q6VVB1 395 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 DPY19L2P2Q6ZN68 376 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 RASSF6Q6ZTQ3 369 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 ADCK1Q86TW2 530 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 IGFN1Q86VF2 1251 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 HIPK1Q86Z02 1210 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 C20orf196Q8IYI0 205 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF433Q8N7K0 673 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-208ENST00000567250 CLDN22Q8N7P3 220 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 LRRC75AQ8NAA5 344 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 S100PBPQ96BU1 408 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 MUCL1Q96DR8 90 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 TXNDC15Q96J42 360 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 TSPAN32Q96QS1 320 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 ALG12Q9BV10 488 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 DENND2DQ9H6A0 471 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-208ENST00000567250 CRLF2Q9HC73 371 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 MOV10Q9HCE1 1003 aaKnown RBP10.72□□□□□ -0.69
SF3B3-208ENST00000567250 NGBQ9NPG2 151 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 OBP2BQ9NPH6 170 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 GLTPQ9NZD2 209 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 CRIM1Q9NZV1 1036 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 PDP1Q9P0J1 537 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF99A8MXY4 864 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-208ENST00000567250 PTP4A3O75365 173 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 EPXP11678 715 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 APEHP13798 732 aaKnown RBP10.71□□□□□ -0.69
SF3B3-208ENST00000567250 ACADSP16219 412 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF23P17027 643 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 PAX7P23759 505 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 COL8A1P27658 744 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 NOS3P29474 1203 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 ACVR1BP36896 505 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF84P51523 738 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 IST1P53990 364 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 CD47Q08722 323 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 FHL1Q13642 323 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 CEACAM16Q2WEN9 425 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 RFX4Q33E94 735 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 ARMC4Q5T2S8 1044 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 C9orf135Q5VTT2 229 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 SVOPLQ8N434 492 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 OR5K1Q8NHB7 308 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 MAGEE2Q8TD90 523 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-208ENST00000567250 PYDC1Q8WXC3 89 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 HSD17B8Q92506 261 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 TMEM54Q969K7 222 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 GTPBP3Q969Y2 492 aaKnown RBP10.71□□□□□ -0.69
SF3B3-208ENST00000567250 MARVELD3Q96A59 401 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 GPA33Q99795 319 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 IFT27Q9BW83 186 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 SMURF2Q9HAU4 748 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 GPR35Q9HC97 309 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 NRIP3Q9NQ35 241 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 TBC1D23Q9NUY8 699 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 ENOPH1Q9UHY7 261 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF346Q9UL40 294 aaKnown RBP10.71□□□□□ -0.69
SF3B3-208ENST00000567250 AMDHD2Q9Y303 409 aa10.71□□□□□ -0.69
SF3B3-208ENST00000567250 MAGED1Q9Y5V3 778 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-208ENST00000567250 TEX13CA0A0J9YWL9 993 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 ERICH4A6NGS2 130 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 OR5H1A6NKK0 313 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 IMPA2O14732 288 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 AHCYL1O43865 530 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 TRMUO75648 421 aaKnown RBP10.7□□□□□ -0.7
SF3B3-208ENST00000567250 WNT11O96014 354 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 GASTP01350 101 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 CDH2P19022 906 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-208ENST00000567250 SSTR2P30874 369 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 FXYD6P3P58550 94 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 ERVK-25P63136 954 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 KRR1Q13601 381 aaKnown RBP10.7□□□□□ -0.7
SF3B3-208ENST00000567250 SNTB1Q13884 538 aaKnown RBP10.7□□□□□ -0.7
SF3B3-208ENST00000567250 PPA1Q15181 289 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 GABRA6Q16445 453 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 FBXW10Q5XX13 1052 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 ANKRD16Q6P6B7 361 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 CD300LDQ6UXZ3 194 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 FAM122BQ7Z309 247 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 JAZF1Q86VZ6 243 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 ZDHHC13Q8IUH4 622 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 ARIH2OSQ8N7S6 290 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 ATG16L2Q8NAA4 619 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 OR1K1Q8NGR3 316 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 LINC01560Q8TB33 94 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 ZNF519Q8TB69 540 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 TEX47Q8TBZ9 253 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 NANOS1Q8WY41 292 aaKnown RBP10.7□□□□□ -0.7
SF3B3-208ENST00000567250 C14orf79Q96F83 325 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 CENPNQ96H22 339 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-208ENST00000567250 BOD1Q96IK1 185 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 KCNK17Q96T54 332 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 FEVQ99581 238 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 FOXB1Q99853 325 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 IL20RAQ9UHF4 553 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms